COCMIDRAFT_34032 (Bipolaris oryzae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 COCMIDRAFT_34032 T365019_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
aod-5
M02602_2.00
Neurospora crassa
NNCGGRDNNN

NNNHYCCGNN
PBM
Weirauch et al.(2014)
pTH8816
0.565 0.872
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUC48549 Zinc cluster 62 102

Links

Other Zinc cluster family TFs
Other Bipolaris oryzae TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.000
Bostr.23794s0377 Boechera stricta Bostr.23794s0377 I 0.000
Bostr.11793s0058 Boechera stricta Bostr.11793s0058 I 0.000
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.000
mgf000337m Mimulus guttatus mgf000337m I 0.000
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.000
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.000
Cla018556 Citrullus lanatus Cla018556 I 0.000
Cla018106 Citrullus lanatus Cla018106 I 0.000
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.000
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.000
TCM_022113 Theobroma cacao TCM_022113 I 0.000
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.000
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I 0.000
Ca_12027 Cicer arietinum Ca_12027 I 0.000
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.000
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.000
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I 0.000
Cagra.0666s0032 Capsella grandiflora Cagra.0666s0032 I 0.000
Cagra.2515s0064 Capsella grandiflora Cagra.2515s0064 I 0.000
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I 0.000
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I 0.000
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.000
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.000
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.000
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.000
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.000
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.000
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.000
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.000
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.000
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.000
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.000
Carubv10025429m.g Capsella rubella Carubv10025429m.g I 0.000
Carubv10018341m.g Capsella rubella Carubv10018341m.g I 0.000
Carubv10015035m.g Capsella rubella Carubv10015035m.g I 0.000
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.000
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.000
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.000
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.000
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.000
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.000
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.000
Bra029784 Brassica rapa Bra029784 I 0.000
Bra003132 Brassica rapa Bra003132 I 0.000
Bo6g067310 Brassica oleracea Bo6g067310 I 0.000
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.000
OB04G18780 Oryza brachyantha OB04G18780 I 0.000
OPUNC04G09650 Oryza punctata OPUNC04G09650 I 0.000
OB04G18770 Oryza brachyantha OB04G18770 I 0.000
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.000
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.000
S1FA1 Arabidopsis thaliana AT3G53370 I 0.000
S1FA2 Arabidopsis thaliana AT2G37120 I 0.000
GRMZM2G147424 Zea mays GRMZM2G147424 N 0.000
GRMZM2G056929 Zea mays GRMZM2G056929 N 0.000
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.000
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N 0.000
MDP0000276000 Malus domestica MDP0000276000 N 0.000
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.000
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.000
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.000
BGIOSGA015143 Oryza indica BGIOSGA015143 N 0.000
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.000
GSMUA_Achr3G17900_001 Musa acuminata GSMUA_Achr3G17900_001 N 0.000
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.000
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.000
Si011030m.g Setaria italica Si011030m.g N 0.000
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 0.000
Sb06g015340 Sorghum bicolor Sb06g015340 N 0.000
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.000
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 0.000
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.000
OS04G0408900 Oryza sativa OS04G0408900 N 0.000
S1FA2 Oryza sativa OS04G0408700 N 0.000
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.000
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.000
OMERI04G10270 Oryza meridionalis OMERI04G10270 N 0.000
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N 0.000
OBART04G11650 Oryza barthii OBART04G11650 N 0.000
MLOC_67411 Hordeum vulgare MLOC_67411 N 0.000
Pm002519 Prunus mume Pm002519 N 0.000
OBART04G11660 Oryza barthii OBART04G11660 N 0.000
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N 0.000
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 0.000
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.000
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N 0.000
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N 0.000
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 0.000