CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOMPIDRAFT_1116881
(
Fomitopsis pinicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
FOMPIDRAFT_1116881
T368121_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-2
M02599_2.00
Neurospora crassa
NNNNCGGRN
NYCCGNNNN
PBM
Weirauch et al.(2014)
pTH8944
0.545
0.769
SCHCODRAFT_110010
M01418_2.00
Schizophyllum commune
NWYCGGAABN
NVTTCCGRWN
PBM
Lambert et al.(2019)
pTH9839
0.538
0.821
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPT03281
Zinc cluster
50
90
HACLYCRRSHMTCDDGRPCQRCIKREIGHLCHDERRSTGKE
Links
Other
Zinc cluster
family TFs
Other
Fomitopsis pinicola
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy