CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLRG_07854
(
Colletotrichum graminicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GLRG_07854
T369633_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02012
M02592_2.00
Neurospora crassa
NCCGGCAD
HTGCCGGN
PBM
Weirauch et al.(2014)
pTH9693
0.555
0.763
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFQ32710
Zinc cluster
53
95
IACRRCRRMRSKCMHDKAQPPCKSCAEAGIPANECVFPQRGQP
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum graminicola
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_13015
Colletotrichum fioriniae
CFIO01_13015
I
0.637
CH063_05865
Colletotrichum higginsianum
CH063_05865
N
0.603
CHGG_06534
Chaetomium globosum
CHGG_06534
I
0.579
X797_009210
Metarhizium robertsii
X797_009210
N
0.571
ACRE_065760
Acremonium chrysogenum
ACRE_065760
I
0.571
FGRRES_17217_M
Fusarium graminearum
FGRRES_17217_M
N
0.558
estExt_fgenesh3_pm.C_20335
Neurospora discreta
estExt_fgenesh3_pm.C_20335
I
0.555
NCU02012
Neurospora crassa
NCU02012
D
0.555
NEUTE1DRAFT_132607
Neurospora tetrasperma
NEUTE1DRAFT_132607
I
0.555
SMAC_05455
Sordaria macrospora
SMAC_05455
I
0.555
PFICI_02953
Pestalotiopsis fici
PFICI_02953
N
0.539