CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NechaG92012
(
Fusarium solani
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
NechaG92012
T375922_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_13344_M
M01417_2.00
Fusarium graminearum
BNGCGGAR
YTCCGCNV
PBM
Lambert et al.(2019)
pTH11414
0.613
0.846
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NechaP92012
Zinc cluster
16
54
KSCAACTKAKRRCDFAVPACLRCSQRCIPCQYPSRTPRG
Links
Other
Zinc cluster
family TFs
Other
Fusarium solani
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.sca_2_chr3_3_0000412
Nectria haematococca
fgenesh1_pm.sca_2_chr3_3_0000412
I
0.683
FPSE_10192
Fusarium pseudograminearum
FPSE_10192
I
0.613
FGRRES_13344_M
Fusarium graminearum
FGRRES_13344_M
D
0.613
TRIATDRAFT_183509
Trichoderma atroviride
TRIATDRAFT_183509
I
0.572
FFUJ_05962
Fusarium fujikuroi
FFUJ_05962
I
0.564
FOXG_03347
Fusarium oxysporum
FOXG_03347
I
0.564
FVEG_02219
Fusarium verticillioides
FVEG_02219
N
0.539