CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PABG_02378
(
Paracoccidioides brasiliensis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PABG_02378
T376684_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-5
M02619_2.00
Neurospora crassa
NNNHCGDNNN
NNNHCGDNNN
PBM
Weirauch et al.(2014)
pTH8350
0.619
0.846
vad-5
M02620_2.00
Neurospora crassa
NNYCGGNWN
NWNCCGRNN
PBM
Weirauch et al.(2014)
pTH8902
0.619
0.846
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEH20119
Zinc cluster
129
168
PSCDACRERKVKCDASDSSSCTECSNRNVRCLFTKETNRR
Links
Other
Zinc cluster
family TFs
Other
Paracoccidioides brasiliensis
TFs
123 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy