CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFICI_12506
(
Pestalotiopsis fici
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PFICI_12506
T378061_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_10600
M01373_2.00
Aspergillus nidulans
YCGGAWAW
WTWTCCGR
PBM
Lambert et al.(2019)
pEX0427
0.556
0.553
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETS75562
Zinc cluster
62
101
RACDTCKRRKSRCSGTIPCDSCIKRGRPRDCHYHAEYRRG
Links
Other
Zinc cluster
family TFs
Other
Pestalotiopsis fici
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy