CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_030540
(
Talaromyces marneffei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PMAA_030540
T379088_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_04175
M01361_2.00
Aspergillus nidulans
NNNCGGRNNN
NNNYCCGNNN
PBM
Lambert et al.(2019)
pEX0225
0.586
0.769
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEA28237
Zinc cluster
25
64
TACVPCRESKIRCDGAQPNCLNCQKKERICRYQHGDDKRK
Links
Other
Zinc cluster
family TFs
Other
Talaromyces marneffei
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy