CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PVAR5_3766
(
Byssochlamys spectabilis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PVAR5_3766
T382511_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
qa-1F
M11489_2.00
Neurospora crassa
HHGGNTAADBVYTYAWCCBB
VVGGWTRARBVHTTANCCDD
Transfac
Matys et al.(2006)
F$QA1F_01
0.616
0.667
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAD95127
Zinc cluster
51
90
RACDQCRSKKDKCDGAQPECSTCVSLRRSCTYRTNPKKRG
Links
Other
Zinc cluster
family TFs
Other
Byssochlamys spectabilis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy