SKUD_194308 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_194308 T383888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YNR063W
M00103_2.00 		Saccharomyces cerevisiae
NNCGGVNDWN
NWHNBCCGNN		 PBM
Badis et al.(2008)
YNR063W_2118 		0.617 0.842
YNR063W
M01592_2.00 		Saccharomyces cerevisiae
NNCGGNNDWN
NWHNNCCGNN		 PBM
Zhu et al.(2009)
Ynr063w 		0.617 0.842
YNR063W
M07530_2.00 		Saccharomyces cerevisiae
KCGGAGAW
WTCTCCGM		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0432.1 		0.617 0.842
YNR063W
M08689_2.00 		Saccharomyces cerevisiae
NBNNNNTCGGAGAWNNNNNN
NNNNNNWTCTCCGANNNNVN		 Misc
DeBoer et al.(2011)
YNR063W_804 		0.617 0.842
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT41322 Zinc cluster 14 54

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

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2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action