CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIREDRAFT_62787
(
Trichoderma reesei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
TRIREDRAFT_62787
T385514_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nit-4
M01430_2.00
Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN
PBM
Lambert et al.(2019)
pTH8909
0.594
0.775
nirA
M01350_2.00
Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS
PBM
Lambert et al.(2019)
pEX0399
0.540
0.675
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGR48042
Zinc cluster
42
82
TACIACRRRKSKCDGAMPSCAACASVYGTECIYNPNSDHRR
Links
Other
Zinc cluster
family TFs
Other
Trichoderma reesei
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy