CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_113696
(
Trichoderma virens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
TRIVIDRAFT_113696
T385562_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
clr-2
M01429_2.00
Neurospora crassa
NNNNNCGGAR
YTCCGNNNNN
PBM
Lambert et al.(2019)
pTH11853
0.547
0.711
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK22542
Zinc cluster
18
57
HACLECQRRKIRCDGKQPCNRCQSSRSRRRCVYEQHRQRL
Links
Other
Zinc cluster
family TFs
Other
Trichoderma virens
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy