VDBG_00044 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_00044 T387437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN

NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.638 0.947
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY13937 Zinc cluster 344 384

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSBTAG00000007074 Bos taurus ENSBTAG00000007074 N 0.000
ZKSCAN8 Canis familiaris ENSCAFG00000011536 N 0.000
ENSCJAG00000018671 Callithrix jacchus ENSCJAG00000018671 N 0.000
ZKSCAN8 Cavia porcellus ENSCPOG00000001885 N 0.000
ENSCSAG00000007997 Chlorocebus sabaeus ENSCSAG00000007997 N 0.000
ZKSCAN8 Dasypus novemcinctus ENSDNOG00000013609 N 0.000
ENSDORG00000008779 Dipodomys ordii ENSDORG00000008779 N 0.000
ZKSCAN8 Equus caballus ENSECAG00000010559 N 0.000
ZKSCAN8 Erinaceus europaeus ENSEEUG00000013894 N 0.000
ZKSCAN8 Echinops telfairi ENSETEG00000000088 N 0.000
ZKSCAN8 Felis catus ENSFCAG00000003621 N 0.000
ZKSCAN8 Homo sapiens ENSG00000198315 N 0.000
ZKSCAN8 Gorilla gorilla ENSGGOG00000016255 N 0.000
ZKSCAN8 Loxodonta africana ENSLAFG00000012845 N 0.000
ENSMEUG00000010768 Macropus eugenii ENSMEUG00000010768 N 0.000
ZKSCAN8 Microcebus murinus ENSMICG00000009423 N 0.000
ZKSCAN8 Macaca mulatta ENSMMUG00000003332 N 0.000
ENSMPUG00000001308 Mustela putorius furo ENSMPUG00000001308 N 0.000
Zkscan8 Mus musculus ENSMUSG00000063894 N 0.000
ENSNLEG00000004477 Nomascus leucogenys ENSNLEG00000004477 N 0.000
ENSOARG00000018000 Ovis aries ENSOARG00000018000 N 0.000
ZKSCAN8 Ochotona princeps ENSOPRG00000002437 N 0.000
ENSP00000332750 Macaca fascicularis ENSP00000332750 N 0.000
ENSPANG00000007710 Papio anubis ENSPANG00000007710 N 0.000
ZKSCAN8 Procavia capensis ENSPCAG00000016377 N 0.000
ENSPPYG00000016366 Pongo abelii ENSPPYG00000016366 N 0.000
ZKSCAN8 Pan troglodytes ENSPTRG00000023125 N 0.000
ZKSCAN8 Pteropus vampyrus ENSPVAG00000014639 N 0.000
Zfp192 Rattus norvegicus ENSRNOG00000053635 N 0.000
ENSSTOG00000004998 Ictidomys tridecemlineatus ENSSTOG00000004998 N 0.000
ENSTBEG00000005093 Tupaia belangeri ENSTBEG00000005093 N 0.000
ENSTSYG00000000671 Tarsius syrichta ENSTSYG00000000671 N 0.000
ZKSCAN8 Tursiops truncatus ENSTTRG00000013471 N 0.000
ZKSCAN8 Vicugna pacos ENSVPAG00000011252 N 0.000
Myotis_brandtii_ZNF192_10002342 Myotis brandtii Myotis_brandtii_ZNF192_10002342 N 0.000