CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VDBG_05272
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_05272
T387518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY19163
Zinc cluster
108
149
RPCDICRQRKTRCVREEGRDKCVMCTFHGQPCTYLRGPLPRK
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_05272
Verticillium albo atrum
VDBG_05272
N
0.683
VDAG_06923
Verticillium dahliae
VDAG_06923
N
0.683
CFIO01_04267
Colletotrichum fioriniae
CFIO01_04267
N
0.659
Cob_11684
Colletotrichum orbiculare
Cob_11684
N
0.659
GLRG_06945
Colletotrichum graminicola
GLRG_06945
N
0.658
MGG_04387
Magnaporthe oryzae
MGG_04387
N
0.579
S40288_03578
Stachybotrys chartarum
S40288_03578
N
0.572
estExt_Genewise1Plus.C_sca_12_chr5_2_00225
Nectria haematococca
estExt_Genewise1Plus.C_sca_12_chr5_2_00225
N
0.551
NechaG68965
Fusarium solani
NechaG68965
N
0.551
FVEG_11594
Fusarium verticillioides
FVEG_11594
N
0.551
FGRRES_10914
Fusarium graminearum
FGRRES_10914
N
0.551
FPSE_01374
Fusarium pseudograminearum
FPSE_01374
N
0.551
FOXG_12849
Fusarium oxysporum
FOXG_12849
N
0.551
FFUJ_08283
Fusarium fujikuroi
FFUJ_08283
N
0.551
TRIVIDRAFT_21566
Trichoderma virens
TRIVIDRAFT_21566
N
0.544