YALI0_C22990g (Yarrowia lipolytica)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YALI0_C22990g T388294_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ASG1
M00088_2.00
Saccharomyces cerevisiae
CGGRDNN

NNHYCCG
PBM
Badis et al.(2008)
ASG1_2140
0.611 0.816
ASG1
M01581_2.00
Saccharomyces cerevisiae
NCGGNDNN

NNHNCCGN
PBM
Zhu et al.(2009)
Asg1
0.611 0.816
ASG1
M07515_2.00
Saccharomyces cerevisiae
CCGGAW

WTCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0275.1
0.611 0.816
ASG1
M08666_2.00
Saccharomyces cerevisiae
CCGGAW

WTCCGG
Misc
DeBoer et al.(2011)
YIL130W_529
0.611 0.816
ASG1
M08667_2.00
Saccharomyces cerevisiae
CCGGVWMHMDBCCGGD

HCCGGVHKDKWBCCGG
Misc
DeBoer et al.(2011)
YIL130W_807
0.611 0.816
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAG82481 Zinc cluster 33 70

Links

Other Zinc cluster family TFs
Other Yarrowia lipolytica TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F443_17620 Phytophthora parasitica F443_17620 N 0.000
fgenesh_scip_prom.28083.7007 Phytophthora lateralis fgenesh_scip_prom.28083.7007 N 0.000
fgenesh_scip_prom.46568.1730 Phytophthora kernoviae fgenesh_scip_prom.46568.1730 N 0.000
Phyra74784 Phytophthora ramorum Phyra74784 N 0.000
Phyra74785 Phytophthora ramorum Phyra74785 N 0.000
Phyra84977 Phytophthora ramorum Phyra84977 N 0.000
Phyra84978 Phytophthora ramorum Phyra84978 N 0.000
PITG_12296 Phytophthora infestans PITG_12296 N 0.000