UGA3 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YDL170W T388337_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and RNA polymerase II sequence-specific DNA-binding transcription factor recruiting activity. Involved in gamma-aminobutyric acid catabolic process; nitrogen catabolite activation of transcription from RNA polymerase II promoter; and nitrogen utilization. Located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UGA3
M00079_2.00		 Saccharomyces cerevisiae
GCGSNNNNN
NNNNNSCGC		 PBM
Badis et al.(2008)
UGA3_4522		 (Direct) (Direct)
UGA3
M07506_2.00		 Saccharomyces cerevisiae
BSGCGGSA
TSCCGCSV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0410.1		 (Direct) (Direct)
UGA3
M08649_2.00		 Saccharomyces cerevisiae
BSGCGGSA
TSCCGCSV		 Misc
DeBoer et al.(2011)
YDL170W_486		 (Direct) (Direct)
UGA3
M08650_2.00		 Saccharomyces cerevisiae
CCGNNNNCGG
CCGNNNNCGG		 Misc
DeBoer et al.(2011)
YDL170W_651		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00079_2.00 Zinc cluster 14 53

DNA Binding Domains

Protein ID Domain From To Sequence
YDL170W Zinc cluster 15 54

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action