URC2 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YDR520C T388343_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables sequence-specific DNA binding activity. Predicted to be involved in uracil catabolic process. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
URC2
M00083_2.00		 Saccharomyces cerevisiae
CGGVNWWHNN
NNDWWNBCCG		 PBM
Badis et al.(2008)
YDR520c_2043		 (Direct) (Direct)
URC2
M01578_2.00		 Saccharomyces cerevisiae
NNNNNNNNDN
NHNNNNNNNN		 PBM
Zhu et al.(2009)
Ydr520c		 (Direct) (Direct)
URC2
M07510_2.00		 Saccharomyces cerevisiae
HCGGANWTAN
NTAWNTCCGD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0422.1		 (Direct) (Direct)
URC2
M08659_2.00		 Saccharomyces cerevisiae
HCGGANWTAN
NTAWNTCCGD		 Misc
DeBoer et al.(2011)
YDR520C_553		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00083_2.00 Zinc cluster 51 91
M01578_2.00 Zinc cluster 70 110

DNA Binding Domains

Protein ID Domain From To Sequence
YDR520C Zinc cluster 70 110

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action