STB5 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YHR178W T388350_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA-binding transcription factor activity. Involved in regulation of transcription from RNA polymerase II promoter in response to oxidative stress; response to xenobiotic stimulus; and transcription elongation from RNA polymerase II promoter. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STB5
M00087_2.00		 Saccharomyces cerevisiae
NCGGNNHKWN
NWMDNNCCGN		 PBM
Badis et al.(2008)
STB5_4529		 (Direct) (Direct)
STB5
M00923_2.00		 Saccharomyces cerevisiae
NCGGNNNHWN
NWDNNNCCGN		 PBM
Gordan et al.(2011)
Stb5		 (Direct) (Direct)
STB5
M07514_2.00		 Saccharomyces cerevisiae
CGGNVHTA
TADBNCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0392.1		 (Direct) (Direct)
STB5
M08664_2.00		 Saccharomyces cerevisiae
CGGNVHKW
WMDBNCCG		 Misc
DeBoer et al.(2011)
YHR178W_1405		 (Direct) (Direct)
STB5
M08665_2.00		 Saccharomyces cerevisiae
BCNGCGGN
NCCGCNGV		 Misc
DeBoer et al.(2011)
YHR178W_2068		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00087_2.00 Zinc cluster 19 57
M00923_2.00 Zinc cluster 20 58

DNA Binding Domains

Protein ID Domain From To Sequence
YHR178W Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action