GSM1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YJL103C T388354_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GSM1
M00090_2.00		 Saccharomyces cerevisiae
DYYCCGGRRH
DYYCCGGRRH		 PBM
Badis et al.(2008)
YJL103C_4534		 (Direct) (Direct)
GSM1
M01583_2.00		 Saccharomyces cerevisiae
NCGGVVNNNN
NNNNBBCCGN		 PBM
Zhu et al.(2009)
Gsm1		 (Direct) (Direct)
GSM1
M08671_2.00		 Saccharomyces cerevisiae
NNHNBTCCGGAGNTWNNHNNN
NNNDNNWANCTCCGGAVNDNN		 Misc
DeBoer et al.(2011)
YJL103C_856		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00090_2.00 Zinc cluster 17 57
M01583_2.00 Zinc cluster 18 58

DNA Binding Domains

Protein ID Domain From To Sequence
YJL103C Zinc cluster 18 58

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action