PPR1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YLR014C T388361_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA-binding transcription factor activity, RNA polymerase II-specific; sequence-specific DNA binding activity; and zinc ion binding activity. Involved in positive regulation of pyrimidine nucleotide biosynthetic process and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PPR1
M08677_2.00		 Saccharomyces cerevisiae
TCGGMVAAKNCCGV
BCGGNMTTBKCCGA		 Misc
DeBoer et al.(2011)
YLR014C_2064		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
YLR014C Zinc cluster 32 71

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

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10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action