CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_pm.C_140174
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh3_pm.C_140174
T389717_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU04663
M02604_2.00
Neurospora crassa
NHDNNNNN
NNNNNHDN
PBM
Weirauch et al.(2014)
pTH8890
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_pm.C_140174
Zinc cluster
259
296
QACDMCRQLKAKCDELKPCKSCKEKKVECKYREAVPKQ
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28288.m000014
Ricinus communis
28288.m000014
I
0.000
29610.m000410
Ricinus communis
29610.m000410
I
0.000
29681.m001296
Ricinus communis
29681.m001296
I
0.000
Aquca_004_00289
Aquilegia coerulea
Aquca_004_00289
I
0.000
Aquca_009_00736
Aquilegia coerulea
Aquca_009_00736
I
0.000
AT2G38090
Arabidopsis thaliana
AT2G38090
D
0.000
AT5G05790
Arabidopsis thaliana
AT5G05790
D
0.000
AT5G58900
Arabidopsis thaliana
AT5G58900
D
0.000
Bo2g002350
Brassica oleracea
Bo2g002350
I
0.000
Bo3g018460
Brassica oleracea
Bo3g018460
I
0.000
Bo3g032160
Brassica oleracea
Bo3g032160
I
0.000
Bo4g029810
Brassica oleracea
Bo4g029810
I
0.000
Bo4g187390
Brassica oleracea
Bo4g187390
I
0.000
Bo9g135730
Brassica oleracea
Bo9g135730
I
0.000
Bostr.13129s0394
Boechera stricta
Bostr.13129s0394
I
0.000
Bostr.23794s0264
Boechera stricta
Bostr.23794s0264
I
0.000
Bostr.26833s0356
Boechera stricta
Bostr.26833s0356
I
0.000
Bra000038
Brassica rapa
Bra000038
I
0.000
Bra002610
Brassica rapa
Bra002610
I
0.000
Bra005139
Brassica rapa
Bra005139
I
0.000
Bra006741
Brassica rapa
Bra006741
I
0.000
Bra017138
Brassica rapa
Bra017138
I
0.000
Bra028892
Brassica rapa
Bra028892
I
0.000
Cagra.0090s0025
Capsella grandiflora
Cagra.0090s0025
I
0.000
Cagra.0891s0087
Capsella grandiflora
Cagra.0891s0087
I
0.000
Cagra.5131s0007
Capsella grandiflora
Cagra.5131s0007
I
0.000
Carubv10001695m.g
Capsella rubella
Carubv10001695m.g
I
0.000
Carubv10023736m.g
Capsella rubella
Carubv10023736m.g
I
0.000
Carubv10026903m.g
Capsella rubella
Carubv10026903m.g
I
0.000
cassava1257.valid.m1
Manihot esculenta
cassava1257.valid.m1
I
0.000
cassava23290.valid.m1
Manihot esculenta
cassava23290.valid.m1
I
0.000
cassava23356.valid.m1
Manihot esculenta
cassava23356.valid.m1
I
0.000
cassava26873.m1
Manihot esculenta
cassava26873.m1
I
0.000
cassava30173.valid.m1
Manihot esculenta
cassava30173.valid.m1
I
0.000
cassava43688.valid.m1
Manihot esculenta
cassava43688.valid.m1
I
0.000
Ca_14247
Cicer arietinum
Ca_14247
I
0.000
Ca_15603
Cicer arietinum
Ca_15603
I
0.000
Ca_19327
Cicer arietinum
Ca_19327
I
0.000
Ciclev10012285m.g
Citrus clementina
Ciclev10012285m.g
I
0.000
Ciclev10028910m.g
Citrus clementina
Ciclev10028910m.g
I
0.000
Ciclev10032309m.g
Citrus clementina
Ciclev10032309m.g
I
0.000
Cla004397
Citrullus lanatus
Cla004397
I
0.000
Cla013553
Citrullus lanatus
Cla013553
I
0.000
Cla018243
Citrullus lanatus
Cla018243
I
0.000
Cla018399
Citrullus lanatus
Cla018399
I
0.000
Cucsa.067080
Cucumis sativus
Cucsa.067080
I
0.000
Cucsa.139090
Cucumis sativus
Cucsa.139090
I
0.000
Cucsa.164580
Cucumis sativus
Cucsa.164580
I
0.000
Cucsa.176140
Cucumis sativus
Cucsa.176140
I
0.000
Eucgr.B02800
Eucalyptus grandis
Eucgr.B02800
I
0.000
Eucgr.J01940
Eucalyptus grandis
Eucgr.J01940
I
0.000
evm.TU.supercontig_112.58
Carica papaya
evm.TU.supercontig_112.58
I
0.000
evm.TU.supercontig_1130.1
Carica papaya
evm.TU.supercontig_1130.1
I
0.000
fgenesh2_kg.4__1876__AT2G38090.1
Arabidopsis lyrata
fgenesh2_kg.4__1876__AT2G38090.1
I
0.000
fgenesh2_kg.8__1829__AT5G58900.1
Arabidopsis lyrata
fgenesh2_kg.8__1829__AT5G58900.1
I
0.000
gene07984-v1.0-hybrid
Fragaria vesca
gene07984-v1.0-hybrid
I
0.000
gene18815-v1.0-hybrid
Fragaria vesca
gene18815-v1.0-hybrid
I
0.000
GLYMA01G27720
Glycine max
GLYMA01G27720
I
0.000
GLYMA02G39000
Glycine max
GLYMA02G39000
I
0.000
GLYMA03G14440
Glycine max
GLYMA03G14440
I
0.000
GLYMA07G17660
Glycine max
GLYMA07G17660
I
0.000
GLYMA11G22960
Glycine max
GLYMA11G22960
I
0.000
GLYMA14G37050
Glycine max
GLYMA14G37050
I
0.000
GLYMA18G07250
Glycine max
GLYMA18G07250
I
0.000
GLYMA18G42530
Glycine max
GLYMA18G42530
I
0.000
Gorai.002G261600
Gossypium raimondii
Gorai.002G261600
I
0.000
Gorai.006G180900
Gossypium raimondii
Gorai.006G180900
I
0.000
Gorai.007G378300
Gossypium raimondii
Gorai.007G378300
I
0.000
Gorai.009G093700
Gossypium raimondii
Gorai.009G093700
I
0.000
Gorai.012G075600
Gossypium raimondii
Gorai.012G075600
I
0.000
Gorai.012G112000
Gossypium raimondii
Gorai.012G112000
I
0.000
GSMUA_Achr10G02290_001
Musa acuminata
GSMUA_Achr10G02290_001
I
0.000
Lus10009884.g
Linum usitatissimum
Lus10009884.g
I
0.000
Lus10014837.g
Linum usitatissimum
Lus10014837.g
I
0.000
Lus10018209.g
Linum usitatissimum
Lus10018209.g
I
0.000
Lus10028264.g
Linum usitatissimum
Lus10028264.g
I
0.000
Lus10040696.g
Linum usitatissimum
Lus10040696.g
I
0.000
MDP0000142580
Malus domestica
MDP0000142580
I
0.000
MDP0000221993
Malus domestica
MDP0000221993
I
0.000
MDP0000243328
Malus domestica
MDP0000243328
I
0.000
MDP0000255630
Malus domestica
MDP0000255630
I
0.000
MDP0000292581
Malus domestica
MDP0000292581
I
0.000
mgf022442m
Mimulus guttatus
mgf022442m
I
0.000
MTR_3g462790
Medicago truncatula
MTR_3g462790
I
0.000
MTR_5g069710
Medicago truncatula
MTR_5g069710
I
0.000
MTR_7g067080
Medicago truncatula
MTR_7g067080
I
0.000
orange1.1g021756m.g
Citrus sinensis
orange1.1g021756m.g
I
0.000
orange1.1g021816m.g
Citrus sinensis
orange1.1g021816m.g
I
0.000
orange1.1g023196m.g
Citrus sinensis
orange1.1g023196m.g
I
0.000
PGSC0003DMG400019129
Solanum tuberosum
PGSC0003DMG400019129
I
0.000
PGSC0003DMG400030348
Solanum tuberosum
PGSC0003DMG400030348
I
0.000
PK27213.1
Cannabis sativa
PK27213.1
D
0.000
PK27693.1
Cannabis sativa
PK27693.1
D
0.000
Pm000529
Prunus mume
Pm000529
I
0.000
Pm002536
Prunus mume
Pm002536
I
0.000
POPTR_0001s25590
Populus trichocarpa
POPTR_0001s25590
I
0.000
POPTR_0006s09860
Populus trichocarpa
POPTR_0006s09860
I
0.000
POPTR_0008s06450
Populus trichocarpa
POPTR_0008s06450
I
0.000
POPTR_0009s04730
Populus trichocarpa
POPTR_0009s04730
I
0.000
POPTR_0010s20040
Populus trichocarpa
POPTR_0010s20040
I
0.000
POPTR_0016s11980
Populus trichocarpa
POPTR_0016s11980
I
0.000
PRUPE_ppa009072mg
Prunus persica
PRUPE_ppa009072mg
I
0.000
PRUPE_ppa009103mg
Prunus persica
PRUPE_ppa009103mg
I
0.000
SapurV1A.0001s0790
Salix purpurea
SapurV1A.0001s0790
I
0.000
SapurV1A.0041s0720
Salix purpurea
SapurV1A.0041s0720
I
0.000
SapurV1A.0262s0080
Salix purpurea
SapurV1A.0262s0080
I
0.000
SapurV1A.0778s0020
Salix purpurea
SapurV1A.0778s0020
I
0.000
SapurV1A.3589s0010
Salix purpurea
SapurV1A.3589s0010
I
0.000
scaffold_600551.1
Arabidopsis lyrata
scaffold_600551.1
I
0.000
SELMODRAFT_47760
Selaginella moellendorffii
SELMODRAFT_47760
N
0.000
SELMODRAFT_47768
Selaginella moellendorffii
SELMODRAFT_47768
N
0.000
Solyc06g076770.2
Solanum lycopersicum
Solyc06g076770.2
I
0.000
TCM_021750
Theobroma cacao
TCM_021750
I
0.000
TCM_041672
Theobroma cacao
TCM_041672
I
0.000
TCM_042604
Theobroma cacao
TCM_042604
I
0.000
Thhalv10014270m.g
Eutrema salsugineum
Thhalv10014270m.g
I
0.000
Thhalv10014410m.g
Eutrema salsugineum
Thhalv10014410m.g
I
0.000
Thhalv10017008m.g
Eutrema salsugineum
Thhalv10017008m.g
I
0.000
VIT_06s0004g06100
Vitis vinifera
VIT_06s0004g06100
I
0.000
VIT_08s0007g01920
Vitis vinifera
VIT_08s0007g01920
I
0.000