CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_70295
(
Fragilariopsis cylindrus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_70295
T389921_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_70295
Zinc cluster
26
54
ASCDRCRARKTKCDGRKPCGNCATKYMKK
Links
Other
Zinc cluster
family TFs
Other
Fragilariopsis cylindrus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_J50045
Phaeodactylum tricornutum
Phatr3_J50045
N
0.640
Thaps25438
Thalassiosira pseudonana
Thaps25438
N
0.640
Thaps23261
Thalassiosira pseudonana
Thaps23261
N
0.586