CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_9000295
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.C_scaffold_9000295
T390104_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_9000295
Zinc cluster
11
49
DSCQSCAASKTKCSKDKPQCARCAKRGTKCEYLVTQRTG
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCSADRAFT_37103
Bipolaris sorokiniana
COCSADRAFT_37103
N
0.683
COCVIDRAFT_101547
Bipolaris victoriae
COCVIDRAFT_101547
N
0.683
COCMIDRAFT_25491
Bipolaris oryzae
COCMIDRAFT_25491
N
0.683
COCCADRAFT_35987
Bipolaris zeicola
COCCADRAFT_35987
N
0.683
COCC4DRAFT_154820
Bipolaris maydis
COCC4DRAFT_154820
N
0.683
SNOG_11079
Stagonospora nodorum
SNOG_11079
N
0.597