CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_1_chr1_3_0001388
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_1_chr1_3_0001388
T390173_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_1_chr1_3_0001388
Zinc cluster
11
50
TGCITCKARKVKCDEAKPECNRCVSTGRKCDGYLPQKQDK
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG75777
Fusarium solani
NechaG75777
N
0.683
CGGC5_13480
Colletotrichum gloeosporioides
CGGC5_13480
N
0.565
S40288_01867
Stachybotrys chartarum
S40288_01867
N
0.554
A1O5_11371
Cladophialophora psammophila
A1O5_11371
N
0.551
Z519_02087
Cladophialophora bantiana
Z519_02087
N
0.551
Z517_03673
Fonsecaea pedrosoi
Z517_03673
N
0.551
CFIO01_05255
Colletotrichum fioriniae
CFIO01_05255
N
0.548
Cob_02344
Colletotrichum orbiculare
Cob_02344
N
0.543
CH063_04039
Colletotrichum higginsianum
CH063_04039
N
0.540