CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_43_chr10_1_0000008
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_43_chr10_1_0000008
T390245_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_43_chr10_1_0000008
Zinc cluster
38
73
LACTACVRRKIRCSKSIPCEACIRQNKASSCQREQV
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG85294
Fusarium solani
NechaG85294
N
0.683
VDBG_04603
Verticillium albo atrum
VDBG_04603
N
0.572
VDBG_04603
Verticillium alfalfae
VDBG_04603
N
0.572
VDAG_04153
Verticillium dahliae
VDAG_04153
N
0.572
FVEG_13362
Fusarium verticillioides
FVEG_13362
N
0.554
FFUJ_12640
Fusarium fujikuroi
FFUJ_12640
N
0.554
FOXG_14518
Fusarium oxysporum
FOXG_14518
N
0.554