fgenesh1_pm.C_scaffold_10000002 (Mycosphaerella fijiensis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pm.C_scaffold_10000002 T390316_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
xlr-1
M02621_2.00
Neurospora crassa
NNNNWNNNN

NNNNWNNNN
PBM
Weirauch et al.(2014)
pTH9683
0.629 0.923
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_10000002 Zinc cluster 81 119

Links

Other Zinc cluster family TFs
Other Mycosphaerella fijiensis TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27613.m000642 Ricinus communis 27613.m000642 N 0.000
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.000
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.000
Bra026077 Brassica rapa Bra026077 N 0.000
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.000
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.000
Ca_09696 Cicer arietinum Ca_09696 N 0.000
Ca_09786 Cicer arietinum Ca_09786 N 0.000
Ca_13855 Cicer arietinum Ca_13855 N 0.000
Cla001429 Citrullus lanatus Cla001429 N 0.000
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.000
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.000
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.000
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.000
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.000
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.000
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.000
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.000
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.000
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.000
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.000
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.000
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.000
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.000
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.000
MDP0000152670 Malus domestica MDP0000152670 N 0.000
MDP0000205236 Malus domestica MDP0000205236 N 0.000
MDP0000284679 Malus domestica MDP0000284679 N 0.000
MDP0000804652 Malus domestica MDP0000804652 N 0.000
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.000
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.000
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.000
Pm012019 Prunus mume Pm012019 N 0.000
Pm015021 Prunus mume Pm015021 N 0.000
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.000
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.000
SCL5 Arabidopsis thaliana AT1G50600 N 0.000
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.000
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.000
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.000
TCM_030733 Theobroma cacao TCM_030733 N 0.000
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.000