CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh3_pm.C_scaffold_9000105
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh3_pm.C_scaffold_9000105
T390375_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05767
M02613_2.00
Neurospora crassa
NNNVCGYN
NRCGBNNN
PBM
Weirauch et al.(2014)
pTH8935
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh3_pm.C_scaffold_9000105
Zinc cluster
9
48
SGCWTCRLRRKKCLEGGPPCSNCESRGIFCHGYGPKPNWK
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy