CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_070340
(
Penicillium marneffei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
PMAA_070340
T392133_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU04663
M02604_2.00
Neurospora crassa
NHDNNNNN
NNNNNHDN
PBM
Weirauch et al.(2014)
pTH8890
0.553
0.525
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_070340.t1
Zinc cluster
253
292
QACDQCRARKAKCDEGRPACSHCRENNIECKYKDIPPQKQ
Links
Other
Zinc cluster
family TFs
Other
Penicillium marneffei
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy