Bo1g011650 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo1g011650 T000717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF015
M06649_2.00 		Arabidopsis thaliana
YCACCGHCANHDNHNNNNNN
NNNNNNDNHDNTGDCGGTGR		 Dap-seq
OMalley et al.(2016)
At4g31060_col_a 		0.761 0.920
ERF015
M06650_2.00 		Arabidopsis thaliana
HDYCACCGACANHNN
NNDNTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At4g31060_colamp_a 		0.761 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g011650.1 AP2 22 73

Links

Other AP2 family TFs
Other Brassica oleracea TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF015 Arabidopsis thaliana AT4G31060 D 0.761
Bostr.7867s0965 Boechera stricta Bostr.7867s0965 I 0.692
Bra010258 Brassica rapa Bra010258 I 0.755
Bra011244 Brassica rapa Bra011244 I 0.831
Cagra.0380s0018 Capsella grandiflora Cagra.0380s0018 I 0.719
Carubv10006208m.g Capsella rubella Carubv10006208m.g I 0.719
scaffold_701105.1 Arabidopsis lyrata scaffold_701105.1 I 0.761
Thhalv10026328m.g Eutrema salsugineum Thhalv10026328m.g I 0.725