Bo7g110320 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo7g110320 T000904_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8S2T3_BRANA
M09745_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01 		0.811 1.000
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.811 1.000
Q8W242_BRANA
M09747_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF_01 		0.707 0.900
Q8S2T2_BRANA
M09744_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF17_01 		0.707 0.900
A6N8P3_BRANA
M09738_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBI5_01 		0.707 0.900
Q8S2T5_BRANA
M09746_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF5_01 		0.705 0.940
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.703 0.860
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.703 0.860
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.703 0.860
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.699 0.880
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.699 0.880
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.696 0.860
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.696 0.860
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.696 0.860
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.696 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g110320.1 AP2 49 100

Links

Other AP2 family TFs
Other Brassica oleracea TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005960 Calypte anna Aan_R005960 I
Aan_R013385 Calypte anna Aan_R013385 I
Afo_R003301 Aptenodytes forsteri Afo_R003301 I
Afo_R010233 Aptenodytes forsteri Afo_R010233 I
Alligator_sinensis_CCG011609.1 Alligator sinensis Alligator_sinensis_CCG011609.1 I
Brh_R004866 Buceros rhinoceros Brh_R004866 I
Brh_R005208 Buceros rhinoceros Brh_R005208 I
Cmyd_10010564 Chelonia mydas Cmyd_10010564 I
Cmyd_10015921 Chelonia mydas Cmyd_10015921 I
TP73 Anolis carolinensis ENSACAG00000001622 I
ENSAMEG00000000763 Ailuropoda melanoleuca ENSAMEG00000000763 I
ENSAMEG00000009237 Ailuropoda melanoleuca ENSAMEG00000009237 I
ENSAMXG00000004843 Astyanax mexicanus ENSAMXG00000004843 I
ENSAMXG00000013958 Astyanax mexicanus ENSAMXG00000013958 I
ENSAPLG00000003880 Anas platyrhynchos ENSAPLG00000003880 I
ENSAPLG00000012917 Anas platyrhynchos ENSAPLG00000012917 I
TP73 Bos taurus ENSBTAG00000005812 I
TP63 Bos taurus ENSBTAG00000015460 I
TP63 Canis familiaris ENSCAFG00000013961 I
TP73 Canis familiaris ENSCAFG00000019489 I
TP63 Choloepus hoffmanni ENSCHOG00000010497 I
TP63 Callithrix jacchus ENSCJAG00000014256 I
TP73 Cavia porcellus ENSCPOG00000010908 I
TP63 Cavia porcellus ENSCPOG00000014770 I
ENSCSAG00000000724 Chlorocebus sabaeus ENSCSAG00000000724 I
ENSCSAG00000009062 Chlorocebus sabaeus ENSCSAG00000009062 I
tp73 Danio rerio ENSDARG00000017953 I
tp63 Danio rerio ENSDARG00000044356 I
TP63 Dasypus novemcinctus ENSDNOG00000016582 I
Trp63 Dipodomys ordii ENSDORG00000002061 I
TP73 Equus caballus ENSECAG00000000771 I
TP63 Equus caballus ENSECAG00000018546 I
TP73 Erinaceus europaeus ENSEEUG00000013128 I
ENSFALG00000007393 Ficedula albicollis ENSFALG00000007393 I
ENSFALG00000009625 Ficedula albicollis ENSFALG00000009625 I
TP63 Felis catus ENSFCAG00000000790 I
TP73 Felis catus ENSFCAG00000011627 I
TP63 Homo sapiens ENSG00000073282 D
TP73 Homo sapiens ENSG00000078900 D
tp73 Gasterosteus aculeatus ENSGACG00000006547 I
ENSGACG00000013629 Gasterosteus aculeatus ENSGACG00000013629 I
TP73 Gallus gallus ENSGALG00000001006 I
TP63 Gallus gallus ENSGALG00000007324 I
TP63 Gorilla gorilla ENSGGOG00000005113 I
TP73 Gorilla gorilla ENSGGOG00000015559 I
ENSGMOG00000000413 Gadus morhua ENSGMOG00000000413 I
ENSLACG00000014214 Latimeria chalumnae ENSLACG00000014214 I
ENSLACG00000019068 Latimeria chalumnae ENSLACG00000019068 I
TP73 Loxodonta africana ENSLAFG00000007013 I
TP63 Loxodonta africana ENSLAFG00000031461 I
ENSLOCG00000005148 Lepisosteus oculatus ENSLOCG00000005148 I
ENSLOCG00000005255 Lepisosteus oculatus ENSLOCG00000005255 I
TP73 Meleagris gallopavo ENSMGAG00000001562 I
TP63 Meleagris gallopavo ENSMGAG00000007535 I
TP63 Microcebus murinus ENSMICG00000005240 I
TP63 Myotis lucifugus ENSMLUG00000015597 I
TP63 Macaca mulatta ENSMMUG00000016466 I
TP73 Macaca mulatta ENSMMUG00000016569 I
TP63 Monodelphis domestica ENSMODG00000015060 I
ENSMPUG00000007407 Mustela putorius furo ENSMPUG00000007407 I
Trp63 Mus musculus ENSMUSG00000022510 D
Trp73 Mus musculus ENSMUSG00000029026 D
ENSNLEG00000006723 Nomascus leucogenys ENSNLEG00000006723 I
TP63 Ornithorhynchus anatinus ENSOANG00000013795 I
ENSOARG00000015833 Ovis aries ENSOARG00000015833 I
ENSOARG00000020478 Ovis aries ENSOARG00000020478 I
TP63 Oryctolagus cuniculus ENSOCUG00000016465 I
TP63 Otolemur garnettii ENSOGAG00000003838 I
TP73 Otolemur garnettii ENSOGAG00000006041 I
ENSONIG00000002106 Oreochromis niloticus ENSONIG00000002106 I
ENSONIG00000019325 Oreochromis niloticus ENSONIG00000019325 I
tp73 Oryzias latipes ENSORLG00000004402 I
tp63 Oryzias latipes ENSORLG00000015665 I
ENSP00000264731 Macaca fascicularis ENSP00000264731 I
ENSP00000264731-D1 Bos grunniens ENSP00000264731-D1 I
ENSP00000367545 Macaca fascicularis ENSP00000367545 I
ENSP00000367545-D1 Bos grunniens ENSP00000367545-D1 I
ENSPANG00000006656 Papio anubis ENSPANG00000006656 I
ENSPANG00000010294 Papio anubis ENSPANG00000010294 I
TP73 Procavia capensis ENSPCAG00000000703 I
TP63 Procavia capensis ENSPCAG00000005011 I
ENSPFOG00000000910 Poecilia formosa ENSPFOG00000000910 I
ENSPFOG00000010828 Poecilia formosa ENSPFOG00000010828 I
ENSPMAG00000009535 Petromyzon marinus ENSPMAG00000009535 I
ENSPPYG00000014401 Pongo abelii ENSPPYG00000014401 I
ENSPSIG00000004164 Pelodiscus sinensis ENSPSIG00000004164 I
ENSPSIG00000016009 Pelodiscus sinensis ENSPSIG00000016009 I
TP63 Pan troglodytes ENSPTRG00000015733 I
TP73 Pteropus vampyrus ENSPVAG00000008937 I
TP63 Pteropus vampyrus ENSPVAG00000009056 I
Tp63 Rattus norvegicus ENSRNOG00000001924 I
Tp73 Rattus norvegicus ENSRNOG00000024707 I
TP63 Sorex araneus ENSSARG00000012752 I
ENSSHAG00000005668 Sarcophilus harrisii ENSSHAG00000005668 I
TP63 Sus scrofa ENSSSCG00000025592 I
TP73 Sus scrofa ENSSSCG00000025685 I
ENSSTOG00000013771 Ictidomys tridecemlineatus ENSSTOG00000013771 I
ENSSTOG00000029194 Ictidomys tridecemlineatus ENSSTOG00000029194 I
TP63 Tupaia belangeri ENSTBEG00000004215 I
TP73 Taeniopygia guttata ENSTGUG00000002743 I
TP63 Taeniopygia guttata ENSTGUG00000009377 I
tp73 Tetraodon nigroviridis ENSTNIG00000011978 I
tp63 Tetraodon nigroviridis ENSTNIG00000013774 I
tp63 Takifugu rubripes ENSTRUG00000003420 I
tp73 Takifugu rubripes ENSTRUG00000014931 I
ENSTSYG00000003709 Tarsius syrichta ENSTSYG00000003709 I
TP73 Tursiops truncatus ENSTTRG00000003435 I
TP63 Tursiops truncatus ENSTTRG00000011638 I
TP63 Vicugna pacos ENSVPAG00000012350 I
ENSXMAG00000016425 Xiphophorus maculatus ENSXMAG00000016425 I
ENSXMAG00000017360 Xiphophorus maculatus ENSXMAG00000017360 I
Gfo_R004420 Geospiza fortis Gfo_R004420 I
Gfo_R009749 Geospiza fortis Gfo_R009749 I
Myotis_brandtii_Tp63_10011644 Myotis brandtii Myotis_brandtii_Tp63_10011644 I
Ogr07265 Ophisaurus gracilis Ogr07265 I
Ogr15303 Ophisaurus gracilis Ogr15303 I
Pvit_07832 Pogona vitticeps Pvit_07832 I
Pvit_15794 Pogona vitticeps Pvit_15794 I
Tal_R007660 Tyto alba Tal_R007660 I
tp63 Xenopus tropicalis XB-GENE-479868 I
tp73 Xenopus tropicalis XB-GENE-482857 I
tp63.L Xenopus laevis XB-GENE-865317 I