Bra028759 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra028759 T001193_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.760 0.918
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.760 0.918
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.693 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra028759.1-P AP2 78 129

Links

Other AP2 family TFs
Other Brassica rapa TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA023255 Oryza indica BGIOSGA023255 N 0.000
BRADI1G36180 Brachypodium distachyon BRADI1G36180 N 0.000
GRMZM2G114680 Zea mays GRMZM2G114680 N 0.000
OMERI06G21310 Oryza meridionalis OMERI06G21310 N 0.000
ONIVA06G24530 Oryza nivara ONIVA06G24530 N 0.000
OPUNC06G18940 Oryza punctata OPUNC06G18940 N 0.000
ORGLA06G0172100 Oryza glaberrima ORGLA06G0172100 N 0.000
ORUFI06G22200 Oryza rufipogon ORUFI06G22200 N 0.000
Pavir.Da00564 Panicum virgatum Pavir.Da00564 N 0.000
Sb10g023950 Sorghum bicolor Sb10g023950 N 0.000