CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G35630
(
Brachypodium distachyon
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BRADI4G35630
T001365_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8GZQ2_MAIZE
M09720_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1A_02
0.709
0.780
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G35630.1
AP2
51
104
PVFRGVRRRGAACRWVCEVRVPGKRGARLWLGTYVTAEAAARAHDAAMLALGSS
Links
Other
AP2
family TFs
Other
Brachypodium distachyon
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB1H
Oryza indica
BGIOSGA029416
I
0.766
DREB1B
Oryza indica
BGIOSGA029417
N
0.680
BRADI1G49560
Brachypodium distachyon
BRADI1G49560
I
0.688
BRADI1G49570
Brachypodium distachyon
BRADI1G49570
I
0.679
BRADI1G57970
Brachypodium distachyon
BRADI1G57970
N
0.696
BRADI4G35570
Brachypodium distachyon
BRADI4G35570
N
0.702
BRADI4G35580
Brachypodium distachyon
BRADI4G35580
I
0.740
F775_18881
Aegilops tauschii
F775_18881
N
0.704
GRMZM2G069082
Zea mays
GRMZM2G069082
I
0.707
GRMZM2G069146
Zea mays
GRMZM2G069146
I
0.687
GRMZM2G124037
Zea mays
GRMZM2G124037
I
0.713
GRMZM2G175856
Zea mays
GRMZM2G175856
N
0.698
MLOC_74460
Hordeum vulgare
MLOC_74460
I
0.717
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
0.766
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
0.772
ONIVA09G17880
Oryza nivara
ONIVA09G17880
N
0.680
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
0.766
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
0.772
ORGLA09G0133000
Oryza glaberrima
ORGLA09G0133000
N
0.680
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
0.766
ORUFI09G18190
Oryza rufipogon
ORUFI09G18190
N
0.680
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
0.766
DREB1H
Oryza sativa
OS09G0522100
I
0.766
Pavir.Fa00114
Panicum virgatum
Pavir.Fa00114
N
0.692
Pavir.J32829
Panicum virgatum
Pavir.J32829
N
0.698
Q8GZQ2_MAIZE
Zea mays
Q8GZQ2_MAIZE
D
0.709
Sb02g030310
Sorghum bicolor
Sb02g030310
I
0.742
Sb07g025210
Sorghum bicolor
Sb07g025210
N
0.697
Si030869m.g
Setaria italica
Si030869m.g
I
0.721
Traes_5BL_0C3609EF0
Triticum aestivum
Traes_5BL_0C3609EF0
N
0.705
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
0.696
Traes_5BL_60510E4A7
Triticum aestivum
Traes_5BL_60510E4A7
I
0.717