PGSC0003DMG400027117 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400027117 T004479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.753 0.918
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.720 0.857
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.720 0.857
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.720 0.857
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.713 0.796
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.712 0.837
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.686 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400069733 AP2 81 132

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002769 Aedes aegypti AAEL002769 N 0.000
AALB003340 Anopheles albimanus AALB003340 I 0.000
AALB003341 Anopheles albimanus AALB003341 N 0.000
AARA009757 Anopheles arabiensis AARA009757 I 0.000
AARA009758 Anopheles arabiensis AARA009758 N 0.000
AATE019368 Anopheles atroparvus AATE019368 N 0.000
ACHR005874 Anopheles christyi ACHR005874 N 0.000
ACHR007729 Anopheles christyi ACHR007729 I 0.000
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I 0.000
ACOM033416 Anopheles coluzzii ACOM033416 N 0.000
ACUA003826 Anopheles culicifacies ACUA003826 I 0.000
ACYPI001696 Acyrthosiphon pisum ACYPI001696 I 0.000
ADIR006615 Anopheles dirus ADIR006615 N 0.000
ADIR006616 Anopheles dirus ADIR006616 I 0.000
AEPI001686 Anopheles epiroticus AEPI001686 N 0.000
AEPI001687 Anopheles epiroticus AEPI001687 I 0.000
AFAF012033 Anopheles farauti AFAF012033 N 0.000
AFUN011260 Anopheles funestus AFUN011260 N 0.000
AGAP004052 Anopheles gambiae AGAP004052 N 0.000
AMAM016687 Anopheles maculatus AMAM016687 N 0.000
AMEC020934 Anopheles melas AMEC020934 N 0.000
AMEM000031 Anopheles merus AMEM000031 N 0.000
AMIN002617 Anopheles minimus AMIN002617 N 0.000
AMIN002618 Anopheles minimus AMIN002618 I 0.000
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I 0.000
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I 0.000
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I 0.000
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I 0.000
AQUA008560 Anopheles quadriannulatus AQUA008560 N 0.000
AQUA008561 Anopheles quadriannulatus AQUA008561 I 0.000
ASTEI07078 Anopheles stephensi ASTEI07078 I 0.000
ASTEI07079 Anopheles stephensi ASTEI07079 N 0.000
ASU_00242 Ascaris suum ASU_00242 I 0.000
A_05794 Schistosoma haematobium A_05794 I 0.000
BGIBMGA005085 Bombyx mori BGIBMGA005085 N 0.000
CapteG2449 Capitella teleta CapteG2449 N 0.000
CBG22984 Caenorhabditis briggsae CBG22984 I 0.000
CBN10125 Caenorhabditis brenneri CBN10125 I 0.000
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I 0.000
CGI_10022026 Crassostrea gigas CGI_10022026 N 0.000
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I 0.000
CLEC000910 Cimex lectularius CLEC000910 N 0.000
CPIJ004052 Culex quinquefasciatus CPIJ004052 I 0.000
CPIJ004053 Culex quinquefasciatus CPIJ004053 N 0.000
CpipJ_CPIJ004052 Culex pipiens CpipJ_CPIJ004052 I 0.000
CpipJ_CPIJ004053 Culex pipiens CpipJ_CPIJ004053 N 0.000
CRE23850 Caenorhabditis remanei CRE23850 I 0.000
csin108622 Clonorchis sinensis csin108622 N 0.000
D917_07791 Trichinella nativa D917_07791 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
DAPPUDRAFT_290533 Daphnia pulex DAPPUDRAFT_290533 I 0.000
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I 0.000
ECPE_0000538001 Echinostoma caproni ECPE_0000538001 N 0.000
EFV53283 Trichinella spiralis EFV53283 I 0.000
EVEC_0001110501 Enterobius vermicularis EVEC_0001110501 I 0.000
pros Drosophila melanogaster FBgn0004595 N 0.000
pros Drosophila simulans FBgn0025030 N 0.000
pros Drosophila virilis FBgn0028753 N 0.000
GA14403 Drosophila pseudoobscura FBgn0074431 N 0.000
GF16857 Drosophila ananassae FBgn0093877 N 0.000
GG18089 Drosophila erecta FBgn0110306 N 0.000
GH21437 Drosophila grimshawi FBgn0128899 N 0.000
GI22696 Drosophila mojavensis FBgn0145423 N 0.000
GL11998 Drosophila persimilis FBgn0149606 I 0.000
GM23939 Drosophila sechellia FBgn0178804 N 0.000
GK11290 Drosophila willistoni FBgn0213301 N 0.000
GE26090 Drosophila yakuba FBgn0243130 N 0.000
GB55033 Apis mellifera GB55033 N 0.000
HCOI01824000 Haemonchus contortus HCOI01824000 I 0.000
HCOI02128500 Haemonchus contortus HCOI02128500 I 0.000
KGM_10139 Danaus plexippus KGM_10139 N 0.000
L889_g22574 Steinernema feltiae L889_g22574 I 0.000
L893_g28279 Steinernema glaseri L893_g28279 I 0.000
L898_g8569 Steinernema monticolum L898_g8569 I 0.000
LCUP011133 Lucilia cuprina LCUP011133 N 0.000
LCUP011134 Lucilia cuprina LCUP011134 I 0.000
LDEC004085 Leptinotarsa decemlineata LDEC004085 N 0.000
LLOJ001671 Lutzomyia longipalpis LLOJ001671 N 0.000
LOAG_14553 Loa loa LOAG_14553 I 0.000
LotgiG183824 Lottia gigantea LotgiG183824 N 0.000
MDOA008728 Musca domestica MDOA008728 N 0.000
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I 0.000
NECAME_07738 Necator americanus NECAME_07738 I 0.000
nLs.2.1.2.g05095 Litomosoides sigmodontis nLs.2.1.2.g05095 I 0.000
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I 0.000
NV15108 Nasonia vitripennis NV15108 N 0.000
Ocbimv22022378m.g Octopus bimaculoides Ocbimv22022378m.g N 0.000
PHUM334550 Pediculus humanus PHUM334550 I 0.000
PPAI010076 Phlebotomus papatasi PPAI010076 I 0.000
PTRK_0001568700 Parastrongyloides trichosuri PTRK_0001568700 I 0.000
RPRC009271 Rhodnius prolixus RPRC009271 N 0.000
SBAD_0000068201 Soboliphyme baturini SBAD_0000068201 I 0.000
SINV18378 Solenopsis invicta SINV18378 I 0.000
SMAR007154 Strigamia maritima SMAR007154 N 0.000
Smp_162760 Schistosoma mansoni Smp_162760 N 0.000
SPAL_0001624500 Strongyloides papillosus SPAL_0001624500 I 0.000
SSTP_0000359900 Strongyloides stercoralis SSTP_0000359900 I 0.000
SVE_0442300 Strongyloides venezuelensis SVE_0442300 I 0.000
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I 0.000
T265_07444 Opisthorchis viverrini T265_07444 N 0.000
TC010596 Tribolium castaneum TC010596 N 0.000
TELCIR_21732 Teladorsagia circumcincta TELCIR_21732 I 0.000
TELCIR_22329 Teladorsagia circumcincta TELCIR_22329 I 0.000
tetur02g12740 Tetranychus urticae tetur02g12740 N 0.000
TMUE_s0183000500 Trichuris muris TMUE_s0183000500 I 0.000
TsM_000259000 Taenia solium TsM_000259000 N 0.000
TTRE_0000134301 Trichuris trichiura TTRE_0000134301 I 0.000
WUBG_06449 Wuchereria bancrofti WUBG_06449 I 0.000
YQE_10516 Dendroctonus ponderosae YQE_10516 I 0.000