30174.m009031 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 30174.m009031 T006771_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.732 0.725
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.732 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30174.m009031 AP2 53 104

Links

Other AP2 family TFs
Other Ricinus communis TFs

247 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29333.m001059 Ricinus communis 29333.m001059 N
NFYA10 Arabidopsis thaliana AT5G06510 N
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N
Carubv10001713m.g Capsella rubella Carubv10001713m.g N
Carubv10014086m.g Capsella rubella Carubv10014086m.g N
cassava41983.valid.m1 Manihot esculenta cassava41983.valid.m1 N
Ca_00866 Cicer arietinum Ca_00866 N
Ca_14455 Cicer arietinum Ca_14455 N
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N
Cla017884 Citrullus lanatus Cla017884 N
Cucsa.241980 Cucumis sativus Cucsa.241980 N
Eucgr.A02570 Eucalyptus grandis Eucgr.A02570 N
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N
GLYMA02G35190 Glycine max GLYMA02G35190 N
GLYMA03G36140 Glycine max GLYMA03G36140 N
GLYMA10G10240 Glycine max GLYMA10G10240 N
GLYMA19G38800 Glycine max GLYMA19G38800 N
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N
Lus10013592.g Linum usitatissimum Lus10013592.g N
Lus10021259.g Linum usitatissimum Lus10021259.g N
MDP0000129029 Malus domestica MDP0000129029 N
MDP0000375005 Malus domestica MDP0000375005 N
MDP0000588222 Malus domestica MDP0000588222 N
MDP0000785523 Malus domestica MDP0000785523 N
MDP0000948645 Malus domestica MDP0000948645 N
mgf025421m Mimulus guttatus mgf025421m N
MTR_1g056530 Medicago truncatula MTR_1g056530 N
MTR_7g106450 Medicago truncatula MTR_7g106450 N
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N
PGSC0003DMG400021365 Solanum tuberosum PGSC0003DMG400021365 N
PK26326.1 Cannabis sativa PK26326.1 N
Pm026038 Prunus mume Pm026038 N
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N
Solyc01g006930.2 Solanum lycopersicum Solyc01g006930.2 N
TCM_022984 Theobroma cacao TCM_022984 N
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N