Bostr.10273s0203 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.10273s0203 T007552_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.793 0.980
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.793 0.980
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10273s0203.1.p AP2 23 74

Links

Other AP2 family TFs
Other Boechera stricta TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28118.m000034 Ricinus communis 28118.m000034 I 0.719
ERF021 Arabidopsis thaliana AT1G71450 D 0.793
Bo2g072910 Brassica oleracea Bo2g072910 I 0.793
Bo6g094210 Brassica oleracea Bo6g094210 I 0.754
Bo6g113020 Brassica oleracea Bo6g113020 I 0.774
Bo8g027240 Brassica oleracea Bo8g027240 I 0.677
Bra003924 Brassica rapa Bra003924 I 0.754
Bra007975 Brassica rapa Bra007975 I 0.778
Bra010210 Brassica rapa Bra010210 I 0.679
Bra016136 Brassica rapa Bra016136 I 0.781
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.793
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.696
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.793
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.728
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.749
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.755
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.710
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.748
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.692
Cla012665 Citrullus lanatus Cla012665 I 0.741
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.747
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.743
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.710
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.733
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.706
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.793
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.728
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.755
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.755
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.705
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.731
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.701
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.702
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.703
MDP0000283350 Malus domestica MDP0000283350 I 0.743
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.755
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.748
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.692
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.707
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.717
Pm004269 Prunus mume Pm004269 I 0.746
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.707
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.732
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.738
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.746
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.729
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.738
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.738
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.688
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.720
TCM_036269 Theobroma cacao TCM_036269 I 0.708
TCM_036270 Theobroma cacao TCM_036270 I 0.691
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.784
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.684
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.692