CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Eucgr.B00666
(
Eucalyptus grandis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Eucgr.B00666
T008111_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.694
0.725
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.694
0.725
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.B00666.1
AP2
16
67
RRFLGVRQRPSGRWVAEIKDSTLKLRLWLGTFNSAEEAALAYDSAAWLLRGR
Links
Other
AP2
family TFs
Other
Eucalyptus grandis
TFs
155 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
1820_Multiple
Saccharomyces mikatae
1820_Multiple
I
2649_YCR065W
Saccharomyces paradoxus
2649_YCR065W
I
2876_YCR065W
Saccharomyces bayanus
2876_YCR065W
I
AACERI_AaceriAAR050C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAR050C
I
AGOS_AAR050C
Ashbya gossypii
AGOS_AAR050C
I
Bcin03g02390
Botrytis cinerea
Bcin03g02390
I
ACLA_008900
Aspergillus clavatus
CADACLAG00000976
I
CADAFLAG00010803
Aspergillus flavus
CADAFLAG00010803
I
AFUA_5G05600
Aspergillus fumigatus
CADAFUAG00006210
I
ANIA_08858
Aspergillus nidulans
CADANIAG00006192
I
CADAORAG00004109
Aspergillus oryzae
CADAORAG00004109
I
ATEG_09469
Aspergillus terreus
CADATEAG00006001
I
NFIA_037450
Neosartorya fischeri
CADNFIAG00003777
I
CAGL0J03608g
Candida glabrata
CAGL0J03608g
I
CANTEDRAFT_132311
Candida tenuis
CANTEDRAFT_132311
I
CaO19.12316
Candida albicans
CaO19.12316
I
CaO19.4853
Candida albicans
CaO19.4853
I
CD36_09290
Candida dubliniensis
CD36_09290
I
CGGC5_1850
Colletotrichum gloeosporioides
CGGC5_1850
I
CH063_10052
Colletotrichum higginsianum
CH063_10052
I
CLUG_00244
Clavispora lusitaniae
CLUG_00244
N
CLUG_00244
Candida lusitaniae
CLUG_00244
N
Cob_10099
Colletotrichum orbiculare
Cob_10099
I
CORT_0A03490
Candida orthopsilosis
CORT_0A03490
I
CPAG_02650
Candida parapsilosis
CPAG_02650
I
CSUB01_05644
Colletotrichum sublineola
CSUB01_05644
I
CTHT_0023230
Chaetomium thermophilum
CTHT_0023230
I
CTRG_03373
Candida tropicalis
CTRG_03373
I
DEHA2F11308g
Debaryomyces hansenii
DEHA2F11308g
I
Ecym_2489
Eremothecium cymbalariae
Ecym_2489
I
EURHEDRAFT_407493
Aspergillus ruber
EURHEDRAFT_407493
I
EV44_g6121
Erysiphe necator
EV44_g6121
I
e_gww1.1.2.693.1
Pichia stipitis
e_gww1.1.2.693.1
N
fgenesh1_pg.00162_#_217
Aspergillus carbonarius
fgenesh1_pg.00162_#_217
I
fgenesh2_pg.C_scaffold_5000694
Neurospora discreta
fgenesh2_pg.C_scaffold_5000694
I
G210_5562
Candida maltosa
G210_5562
N
GLRG_00119
Colletotrichum graminicola
GLRG_00119
I
GNLVRS01_PISO0K10196g
Millerozyma farinosa
GNLVRS01_PISO0K10196g
N
GNLVRS01_PISO0L10197g
Millerozyma farinosa
GNLVRS01_PISO0L10197g
N
KLLA0_C08778g
Kluyveromyces lactis
KLLA0_C08778g
N
KLTH0A06534g
Kluyveromyces thermotolerans
KLTH0A06534g
I
KLTH0A06534g
Lachancea thermotolerans
KLTH0A06534g
I
KUCA_T00001016001
Kuraishia capsulata
KUCA_T00001016001
I
Kwal_6278
Kluyveromyces waltii
Kwal_6278
I
LALA0_S02e07250g
Lachancea lanzarotensis
LALA0_S02e07250g
I
MBM_03132
Marssonina brunnea
MBM_03132
I
MPH_06970
Macrophomina phaseolina
MPH_06970
I
NCU06173
Neurospora crassa
NCU06173
D
NEUTE1DRAFT_81248
Neurospora tetrasperma
NEUTE1DRAFT_81248
I
OIDMADRAFT_135267
Oidiodendron maius
OIDMADRAFT_135267
I
Pc20g00650
Penicillium chrysogenum
Pc20g00650
I
PCH_Pc20g00650
Penicillium rubens
PCH_Pc20g00650
I
PDE_02308
Penicillium oxalicum
PDE_02308
I
PDIP_22270
Penicillium digitatum
PDIP_22270
I
PGUG_03609
Meyerozyma guilliermondii
PGUG_03609
I
PGUG_03609
Candida guilliermondii
PGUG_03609
I
PICST_53324
Scheffersomyces stipitis
PICST_53324
N
PITC_087800
Penicillium italicum
PITC_087800
I
PNEG_00623
Pneumocystis murina
PNEG_00623
I
PODANS_7_8160
Podospora anserina
PODANS_7_8160
I
PVAR5_4466
Byssochlamys spectabilis
PVAR5_4466
I
SBOR_6605
Sclerotinia borealis
SBOR_6605
I
SMAC_05348
Sordaria macrospora
SMAC_05348
I
SOCG_00186
Schizosaccharomyces octosporus
SOCG_00186
I
SPAPADRAFT_68220
Spathaspora passalidarum
SPAPADRAFT_68220
N
sep1
Schizosaccharomyces pombe
SPBC4C3.12
I
SPOG_02771
Schizosaccharomyces cryophilus
SPOG_02771
I
SS1G_00580
Sclerotinia sclerotiorum
SS1G_00580
I
U727_00430251281
Penicillium solitum
U727_00430251281
I
UCRNP2_7609
Neofusicoccum parvum
UCRNP2_7609
I
HCM1
Saccharomyces cerevisiae
YCR065W
D