Eucgr.B00666 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.B00666 T008111_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.694 0.725
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.694 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B00666.1 AP2 16 67

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.745
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.727
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.725
TCM_014471 Theobroma cacao TCM_014471 I 0.722
30174.m009031 Ricinus communis 30174.m009031 I 0.718
MDP0000157628 Malus domestica MDP0000157628 I 0.716
MDP0000197375 Malus domestica MDP0000197375 I 0.716
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.716
Pm030235 Prunus mume Pm030235 I 0.712
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.711
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.709
Pm000004 Prunus mume Pm000004 I 0.706
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.706
TCM_011632 Theobroma cacao TCM_011632 I 0.706
MDP0000525933 Malus domestica MDP0000525933 I 0.706
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.706
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.704
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.703
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.701
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.698
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.698
mgf022665m Mimulus guttatus mgf022665m I 0.697
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.697
TCM_018659 Theobroma cacao TCM_018659 I 0.695
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.695
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.695
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.695
Ca_10494 Cicer arietinum Ca_10494 I 0.695
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.695
MDP0000276536 Malus domestica MDP0000276536 I 0.695
Si038848m.g Setaria italica Si038848m.g I 0.695
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.695
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.695
MDP0000551969 Malus domestica MDP0000551969 I 0.695
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.695
Si024417m.g Setaria italica Si024417m.g I 0.695
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.695
Cla010474 Citrullus lanatus Cla010474 I 0.695
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.695
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.695
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.695
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.695
PK13330.1 Cannabis sativa PK13330.1 I 0.695
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.695
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.695
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.695
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.695
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.695
Pm015931 Prunus mume Pm015931 I 0.695
29635.m000461 Ricinus communis 29635.m000461 I 0.695
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.695
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.695
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.695
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.695
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.695
F775_02727 Aegilops tauschii F775_02727 I 0.695
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.695
OS12G0582900 Oryza sativa OS12G0582900 I 0.695
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.695
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.695
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.695
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.695
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.695
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.695
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.695
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.695
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.695
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.695
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.695
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.695
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.695
OBART12G17080 Oryza barthii OBART12G17080 I 0.695
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.695
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.695
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.694
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.694
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.694
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.694
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.694
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.694
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.694
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.694
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.694
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.694
Bo2g018360 Brassica oleracea Bo2g018360 I 0.694
Bo3g013830 Brassica oleracea Bo3g013830 I 0.694
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.694
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.694
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.694
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.694
Bo9g152440 Brassica oleracea Bo9g152440 I 0.694
Bra002262 Brassica rapa Bra002262 I 0.694
MDP0000177547 Malus domestica MDP0000177547 I 0.694
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.694
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.694
Bra020063 Brassica rapa Bra020063 I 0.694
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.694
Bra006518 Brassica rapa Bra006518 I 0.694
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.694
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.694
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.694
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.694
Cla012318 Citrullus lanatus Cla012318 I 0.694
OS07G0204000 Oryza sativa OS07G0204000 I 0.694
Pm025326 Prunus mume Pm025326 I 0.694
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.694
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.694
Ca_08232 Cicer arietinum Ca_08232 I 0.694
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.694
TCM_040015 Theobroma cacao TCM_040015 I 0.694
TCM_025913 Theobroma cacao TCM_025913 I 0.694
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.694
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.694
30084.m000185 Ricinus communis 30084.m000185 I 0.694
OBART07G06690 Oryza barthii OBART07G06690 I 0.694
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.694
OB07G15030 Oryza brachyantha OB07G15030 I 0.694
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.694
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.694
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.694
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.694
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.694
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.694
Si033237m.g Setaria italica Si033237m.g I 0.694
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.694
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.693
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.693
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.693
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.693
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.693
29813.m001543 Ricinus communis 29813.m001543 I 0.693
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.693
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.693
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.693
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.692
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.692
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.691
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.690
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.690
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.686
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.686
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.686
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.684
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.684
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.684
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.683
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.681
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.681
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.681
PK28640.1 Cannabis sativa PK28640.1 I 0.680
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.680
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.679
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.679
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.678
PK25269.1 Cannabis sativa PK25269.1 I 0.677