Pavir.Ga01110 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Ga01110 T009471_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga01110.1.p AP2 16 66

Links

Other AP2 family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA016949 Oryza indica BGIOSGA016949 N 0.712
Eucgr.D01924 Eucalyptus grandis Eucgr.D01924 I 0.690
GRMZM2G368838 Zea mays GRMZM2G368838 N 0.741
LPERR04G18180 Leersia perrieri LPERR04G18180 N 0.703
OBART04G22210 Oryza barthii OBART04G22210 N 0.712
OGLUM04G22250 Oryza glumaepatula OGLUM04G22250 N 0.712
OMERI04G18760 Oryza meridionalis OMERI04G18760 N 0.712
ONIVA04G20830 Oryza nivara ONIVA04G20830 N 0.712
OPUNC04G19950 Oryza punctata OPUNC04G19950 N 0.718
ORUFI04G23880 Oryza rufipogon ORUFI04G23880 N 0.712
OS04G0572200 Oryza sativa OS04G0572200 N 0.712
Pavir.Ga00932 Panicum virgatum Pavir.Ga00932 N 0.730
Pavir.Gb00885 Panicum virgatum Pavir.Gb00885 N 0.732
Sb06g025890 Sorghum bicolor Sb06g025890 N 0.733
Si011086m.g Setaria italica Si011086m.g N 0.732