CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC04G19950
(
Oryza punctata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OPUNC04G19950
T003743_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC04G19950.1
AP2
16
66
PFYRGIRSRSGKWVSEIREPRKTRRIWLGTFPTAEMAAVAYDVAALALRGP
Links
Other
AP2
family TFs
Other
Oryza punctata
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G368838
Zea mays
GRMZM2G368838
N
0.718
Pavir.Ga01110
Panicum virgatum
Pavir.Ga01110
N
0.718
Sb06g025890
Sorghum bicolor
Sb06g025890
N
0.710
Eucgr.D01924
Eucalyptus grandis
Eucgr.D01924
I
0.710
Si011086m.g
Setaria italica
Si011086m.g
N
0.709
Pavir.Gb00885
Panicum virgatum
Pavir.Gb00885
N
0.709
Pavir.Ga00932
Panicum virgatum
Pavir.Ga00932
N
0.707
VIT_02s0025g04440
Vitis vinifera
VIT_02s0025g04440
N
0.694
cassava21336.m1
Manihot esculenta
cassava21336.m1
N
0.694
Ciclev10005869m.g
Citrus clementina
Ciclev10005869m.g
N
0.694
orange1.1g028004m.g
Citrus sinensis
orange1.1g028004m.g
N
0.694
Cla006314
Citrullus lanatus
Cla006314
N
0.690
BGIOSGA016949
Oryza indica
BGIOSGA016949
N
0.689
OBART04G22210
Oryza barthii
OBART04G22210
N
0.689
OGLUM04G22250
Oryza glumaepatula
OGLUM04G22250
N
0.689
OMERI04G18760
Oryza meridionalis
OMERI04G18760
N
0.689
ONIVA04G20830
Oryza nivara
ONIVA04G20830
N
0.689
ORUFI04G23880
Oryza rufipogon
ORUFI04G23880
N
0.689
OS04G0572200
Oryza sativa
OS04G0572200
N
0.689
Gorai.007G010200
Gossypium raimondii
Gorai.007G010200
N
0.689
TCM_015083
Theobroma cacao
TCM_015083
N
0.688
30190.m011121
Ricinus communis
30190.m011121
N
0.685
Gorai.006G197200
Gossypium raimondii
Gorai.006G197200
N
0.685
LPERR04G18180
Leersia perrieri
LPERR04G18180
N
0.680