CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G197200
(
Gossypium raimondii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Gorai.006G197200
T008564_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G197200.1
AP2
46
96
SSYRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAATAYDVAAIALKGP
Links
Other
AP2
family TFs
Other
Gossypium raimondii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_015083
Theobroma cacao
TCM_015083
N
0.721
cassava21336.m1
Manihot esculenta
cassava21336.m1
N
0.718
Ciclev10005869m.g
Citrus clementina
Ciclev10005869m.g
N
0.718
orange1.1g028004m.g
Citrus sinensis
orange1.1g028004m.g
N
0.718
Gorai.007G010200
Gossypium raimondii
Gorai.007G010200
N
0.701
Cla006314
Citrullus lanatus
Cla006314
N
0.692
VIT_02s0025g04440
Vitis vinifera
VIT_02s0025g04440
N
0.691
Eucgr.D01924
Eucalyptus grandis
Eucgr.D01924
I
0.689
OPUNC04G19950
Oryza punctata
OPUNC04G19950
N
0.685
cassava35063.m1
Manihot esculenta
cassava35063.m1
N
0.684
SapurV1A.0068s0570
Salix purpurea
SapurV1A.0068s0570
N
0.681