CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G010200
(
Gossypium raimondii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Gorai.007G010200
T008577_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G010200.1
AP2
70
120
AVYRGVRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAATAYDVAALALKGP
Links
Other
AP2
family TFs
Other
Gossypium raimondii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_015083
Theobroma cacao
TCM_015083
N
0.706
Cla006314
Citrullus lanatus
Cla006314
N
0.702
Gorai.006G197200
Gossypium raimondii
Gorai.006G197200
N
0.701
cassava21336.m1
Manihot esculenta
cassava21336.m1
N
0.700
Ciclev10005869m.g
Citrus clementina
Ciclev10005869m.g
N
0.700
orange1.1g028004m.g
Citrus sinensis
orange1.1g028004m.g
N
0.700
VIT_02s0025g04440
Vitis vinifera
VIT_02s0025g04440
N
0.699
mgf025854m
Mimulus guttatus
mgf025854m
I
0.697
Eucgr.D01924
Eucalyptus grandis
Eucgr.D01924
I
0.694
OPUNC04G19950
Oryza punctata
OPUNC04G19950
N
0.689
SapurV1A.0045s0730
Salix purpurea
SapurV1A.0045s0730
N
0.682