CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava35063.m1
(
Manihot esculenta
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
cassava35063.m1
T006898_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava35063.m1
AP2
41
91
PSYKGIRSRSGKWVSEIREPRKTTRIWLGTYSTPEMAAAAYDVAALALKGP
Links
Other
AP2
family TFs
Other
Manihot esculenta
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava21336.m1
Manihot esculenta
cassava21336.m1
N
0.698
Ciclev10005869m.g
Citrus clementina
Ciclev10005869m.g
N
0.698
orange1.1g028004m.g
Citrus sinensis
orange1.1g028004m.g
N
0.698
Gorai.006G197200
Gossypium raimondii
Gorai.006G197200
N
0.684
TCM_015083
Theobroma cacao
TCM_015083
N
0.677