ENSPFOG00000010024 (Poecilia formosa)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSPFOG00000010024 T014717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.628 0.628
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.628 0.628
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.600 0.640
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.578 0.570
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.578 0.570
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.578 0.570
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.578 0.570
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.520 0.558
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000010012 ARID/BRIGHT 202 288

Links

Other ARID/BRIGHT family TFs
Other Poecilia formosa TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30146.m003443 Ricinus communis 30146.m003443 N 0.000
AMTR_s00036p00178030 Amborella trichopoda AMTR_s00036p00178030 N 0.000
AMTR_s00071p00111940 Amborella trichopoda AMTR_s00071p00111940 N 0.000
Aquca_001_00189 Aquilegia coerulea Aquca_001_00189 N 0.000
BHLH87 Arabidopsis thaliana AT3G21330 N 0.000
Bo3g078540 Brassica oleracea Bo3g078540 N 0.000
Bo5g101160 Brassica oleracea Bo5g101160 N 0.000
Bostr.19424s0519 Boechera stricta Bostr.19424s0519 N 0.000
Bra001826 Brassica rapa Bra001826 N 0.000
Bra031275 Brassica rapa Bra031275 N 0.000
Cagra.1757s0024 Capsella grandiflora Cagra.1757s0024 N 0.000
Carubv10013989m.g Capsella rubella Carubv10013989m.g N 0.000
cassava2779.m1 Manihot esculenta cassava2779.m1 N 0.000
cassava34914.m1 Manihot esculenta cassava34914.m1 N 0.000
Ca_02767 Cicer arietinum Ca_02767 N 0.000
Ca_10121 Cicer arietinum Ca_10121 N 0.000
chr3.CM1570.150.nc Lotus japonicus chr3.CM1570.150.nc N 0.000
Ciclev10026976m.g Citrus clementina Ciclev10026976m.g N 0.000
Cla012836 Citrullus lanatus Cla012836 N 0.000
Cla015855 Citrullus lanatus Cla015855 N 0.000
Cucsa.360770 Cucumis sativus Cucsa.360770 N 0.000
Eucgr.F03093 Eucalyptus grandis Eucgr.F03093 N 0.000
evm.TU.supercontig_131.7 Carica papaya evm.TU.supercontig_131.7 N 0.000
fgenesh2_kg.3__2354__AT3G21330.1 Arabidopsis lyrata fgenesh2_kg.3__2354__AT3G21330.1 N 0.000
gene22897-v1.0-hybrid Fragaria vesca gene22897-v1.0-hybrid N 0.000
GLYMA07G01611 Glycine max GLYMA07G01611 N 0.000
GLYMA08G21130 Glycine max GLYMA08G21130 N 0.000
GLYMA13G42900 Glycine max GLYMA13G42900 N 0.000
GLYMA15G02531 Glycine max GLYMA15G02531 N 0.000
Gorai.003G060900 Gossypium raimondii Gorai.003G060900 N 0.000
Gorai.011G069200 Gossypium raimondii Gorai.011G069200 N 0.000
Lus10003500.g Linum usitatissimum Lus10003500.g N 0.000
Lus10009745.g Linum usitatissimum Lus10009745.g N 0.000
MDP0000145937 Malus domestica MDP0000145937 N 0.000
MDP0000166245 Malus domestica MDP0000166245 N 0.000
mgf023933m Mimulus guttatus mgf023933m N 0.000
MTR_2g100490 Medicago truncatula MTR_2g100490 N 0.000
MTR_8g015450 Medicago truncatula MTR_8g015450 N 0.000
orange1.1g020172m.g Citrus sinensis orange1.1g020172m.g N 0.000
orange1.1g047850m.g Citrus sinensis orange1.1g047850m.g N 0.000
PGSC0003DMG400018986 Solanum tuberosum PGSC0003DMG400018986 N 0.000
PK21140.1 Cannabis sativa PK21140.1 N 0.000
Pm030884 Prunus mume Pm030884 N 0.000
POPTR_0001s19250 Populus trichocarpa POPTR_0001s19250 N 0.000
PRUPE_ppa015446mg Prunus persica PRUPE_ppa015446mg N 0.000
SapurV1A.2172s0010 Salix purpurea SapurV1A.2172s0010 N 0.000
Solyc03g121240.1 Solanum lycopersicum Solyc03g121240.1 N 0.000
Solyc06g062460.2 Solanum lycopersicum Solyc06g062460.2 N 0.000
TCM_028961 Theobroma cacao TCM_028961 N 0.000
Thhalv10022273m.g Eutrema salsugineum Thhalv10022273m.g N 0.000
VIT_09s0002g02700 Vitis vinifera VIT_09s0002g02700 N 0.000