CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_005304
(
Theobroma cacao
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
TCM_005304
T015683_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX95917
ARID/BRIGHT
44
129
FWFNKFLASFLKEICAQGCFWPLPPMLGDGQPVDLFKLFLVVREKGGYNAVSESGLWDLVAEESGLGLNVASSVKLVYVKYLVSLE
EOX95918
ARID/BRIGHT
44
129
FWFNKFLASFLKEICAQGCFWPLPPMLGDGQPVDLFKLFLVVREKGGYNAVSESGLWDLVAEESGLGLNVASSVKLVYVKYLVSLE
EOX95919
ARID/BRIGHT
49
134
FWFNKFLASFLKEICAQGCFWPLPPMLGDGQPVDLFKLFLVVREKGGYNAVSESGLWDLVAEESGLGLNVASSVKLVYVKYLVSLE
Links
Other
ARID/BRIGHT
family TFs
Other
Theobroma cacao
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008628
Ricinus communis
30174.m008628
N
0.535
Bo9g091440
Brassica oleracea
Bo9g091440
N
0.434
Bostr.25463s0183
Boechera stricta
Bostr.25463s0183
N
0.426
Bra035227
Brassica rapa
Bra035227
N
0.434
Ca_05766
Cicer arietinum
Ca_05766
N
0.494
CM1729.150.nc
Lotus japonicus
CM1729.150.nc
N
0.430
evm.TU.supercontig_1258.5
Carica papaya
evm.TU.supercontig_1258.5
N
0.545
evm.TU.supercontig_214.10
Carica papaya
evm.TU.supercontig_214.10
N
0.425
Gorai.001G168400
Gossypium raimondii
Gorai.001G168400
N
0.751
Gorai.008G120900
Gossypium raimondii
Gorai.008G120900
N
0.695
MDP0000470728
Malus domestica
MDP0000470728
N
0.492
SapurV1A.0139s0170
Salix purpurea
SapurV1A.0139s0170
N
0.445
VIT_02s0025g00040
Vitis vinifera
VIT_02s0025g00040
N
0.452