CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_1258.5
(
Carica papaya
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
evm.TU.supercontig_1258.5
T016103_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_1258.5
ARID/BRIGHT
47
131
CFYLLIRSFLKGVCALGSSRPLPPMLGDGQSVDLLKLFLLVREKGGYDAVSENGLWDLVTEESGLALDAASSVKLVYTKYLDALE
Links
Other
ARID/BRIGHT
family TFs
Other
Carica papaya
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008628
Ricinus communis
30174.m008628
N
0.557
TCM_005304
Theobroma cacao
TCM_005304
N
0.545
Gorai.001G168400
Gossypium raimondii
Gorai.001G168400
N
0.538
SapurV1A.0139s0170
Salix purpurea
SapurV1A.0139s0170
N
0.468
Gorai.008G120900
Gossypium raimondii
Gorai.008G120900
N
0.456
GL50803_8102
Giardia lamblia
GL50803_8102
N
0.428
evm.TU.supercontig_214.10
Carica papaya
evm.TU.supercontig_214.10
N
0.426
Ca_05766
Cicer arietinum
Ca_05766
N
0.423