CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.001G168400
(
Gossypium raimondii
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
Gorai.001G168400
T016120_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G168400.1
ARID/BRIGHT
59
141
NKFLGLFLKEICAQGCVCSLPPMAEGGQPVDWLKLFLVVREKGGYNAVSESGLWDSVATESGLGLNVASLVKLVYIKYLVSLE
Links
Other
ARID/BRIGHT
family TFs
Other
Gossypium raimondii
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_005304
Theobroma cacao
TCM_005304
N
0.751
Gorai.008G120900
Gossypium raimondii
Gorai.008G120900
N
0.662
evm.TU.supercontig_1258.5
Carica papaya
evm.TU.supercontig_1258.5
N
0.538
MDP0000470728
Malus domestica
MDP0000470728
N
0.505
30174.m008628
Ricinus communis
30174.m008628
N
0.501
Ca_05766
Cicer arietinum
Ca_05766
N
0.474
VIT_02s0025g00040
Vitis vinifera
VIT_02s0025g00040
N
0.439
SapurV1A.0139s0170
Salix purpurea
SapurV1A.0139s0170
N
0.438
CM1729.150.nc
Lotus japonicus
CM1729.150.nc
N
0.430