CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

estExt_Genewise1Plus.C_20997 *(Heterobasidion annosum)* AT hook
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02178 (AT_hook)	IPR017956	estExt_Genewise1Plus.C_20997	T018105_2.00	Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HMGA M01671_2.00	Arabidopsis thaliana	NNNNDWAWH	DWTWHNNNN	PBM Weirauch et al.(2014) pTH7395	0.991	0.620
HMG-I Y M02652_2.00	Pisum sativum	NDWVAAANRVMRWMAY	RTKWYKBYNTTTBWHN	SELEX Mathelier et al.(2014) MA0045.1	0.991	0.520
NCU01145 M01693_2.00	Neurospora crassa	RWATAWWTNN	NNAWWTATWY	PBM Weirauch et al.(2014) pTH8916	0.991	0.435
ANIA_01690 M01675_2.00	Aspergillus nidulans	NNNNRHDDN	NHHDYNNNN	PBM Weirauch et al.(2014) pTH8216	0.991	0.420
Hmga2 M00751_2.00	Mus musculus	NNNNRHWWNN	NNWWDYNNNN	PBM Weirauch et al.(2013) pTH3046	0.991	0.420
athp-3 M01691_2.00	Caenorhabditis elegans	NNDDWDH	DHWHHNN	PBM Weirauch et al.(2014) pTH9097	0.991	0.419
ENSPPYG00000004736 M01685_2.00	Pongo abelii	NNNNDWWW	WWWHNNNN	PBM Weirauch et al.(2014) pTH9279	0.991	0.400
FGRRES_05233 M01104_2.00	Fusarium graminearum	NNNDWWAWWH	DWWTWWHNNN	PBM Lambert et al.(2019) pTH11377	0.991	0.400
HMGA2 M09771_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGA2_01	0.991	0.400
HMGA1 M09769_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGIY_01	0.991	0.400
HMGA1 M09770_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HMGIY_Q4	0.991	0.400
NCU05635 M01694_2.00	Neurospora crassa	NNNWWWWNNN	NNNWWWWNNN	PBM Weirauch et al.(2014) pTH8863	0.991	0.380
TVAG_474020 M01106_2.00	Trichomonas vaginalis	DNWWWAWW	WWTWWWNH	PBM Lambert et al.(2019) pTH11493	0.991	0.340
BRADI3G55950 M01673_2.00	Brachypodium distachyon	NNNNRHDDN	NHHDYNNNN	PBM Weirauch et al.(2014) pTH9369	0.991	0.320
OS02G0824300 M01688_2.00	Oryza sativa	NNDWAWWN	NWWTWHNN	PBM Weirauch et al.(2014) pTH8406	0.991	0.320
AHL13 M01672_2.00	Arabidopsis thaliana	NAWWTAWWWN	NWWWTAWWTN	PBM Weirauch et al.(2014) pTH8202	0.991	0.300
FGRRES_17512 M01105_2.00	Fusarium graminearum	NNNDNWWWW	WWWWNHNNN	PBM Lambert et al.(2019) pTH11412	0.991	0.300
hmg-12 M01690_2.00	Caenorhabditis elegans	NNAWWTAWWTNN	NNAWWTAWWTNN	PBM Weirauch et al.(2014) pTH8997	0.991	0.284
SUM1 M00008_2.00	Saccharomyces cerevisiae	NNDWWWH	DWWWHNN	PBM Badis et al.(2008) SUM1_2124	0.991	0.280
Q7DLU9_PEA M09772_2.00	Pisum sativum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$HMGIY_01	0.991	0.280
VIT_08s0007g04020 M01689_2.00	Vitis vinifera	DBNDDDDDDN	NHHHHHHNVH	PBM Weirauch et al.(2014) pTH9295	0.991	0.260
SUM1 M07439_2.00	Saccharomyces cerevisiae	DWAAATWWN	NWWATTTWH	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0398.1	0.991	0.260
SUM1 M08478_2.00	Saccharomyces cerevisiae	RYGWCASWAAW	WTTWSTGWCRY	Misc DeBoer et al.(2011) YDR310C_383	0.991	0.260
SUM1 M08479_2.00	Saccharomyces cerevisiae	DWAAATWWN	NWWATTTWH	Misc DeBoer et al.(2011) YDR310C_478	0.991	0.260
MTR_4g101990 M01687_2.00	Medicago truncatula	AAAWTAAT	ATTAWTTT	PBM Weirauch et al.(2014) pTH9209	0.991	0.180
estExt_fgeneshNG_pg.C_820014 M01692_2.00	Naegleria gruberi	NNNNNDRH	DYHNNNNN	PBM Weirauch et al.(2014) pTH9380	0.991	0.180
BRADI5G22430 M01674_2.00	Brachypodium distachyon	VNRDDDHDD	HHDHHHYNB	PBM Weirauch et al.(2014) pTH9242	0.991	0.160
ATEG_07399 M01676_2.00	Aspergillus terreus	DHNNHNDWWW	WWWHNDNNDH	PBM Weirauch et al.(2014) pTH9237	0.991	0.160
ENSACAG00000014978 M01677_2.00	Anolis carolinensis	NNNNNDRH	DYHNNNNN	PBM Weirauch et al.(2014) pTH9222	0.991	0.160
phf21ab M01678_2.00	Danio rerio	NNNDNADW	WHTNHNNN	PBM Weirauch et al.(2014) pTH9254	0.991	0.160
phf21ab M01680_2.00	Gasterosteus aculeatus	AAAAWAAA	TTTWTTTT	PBM Weirauch et al.(2014) pTH9180	0.991	0.160
PHF21A M01681_2.00	Meleagris gallopavo	HDNHNNDNHD	HDNHNNDNHD	PBM Weirauch et al.(2014) pTH7875	0.991	0.160
PHF21A M01103_2.00	Monodelphis domestica	NNNAWATWAATN	NATTWATWTNNN	PBM Lambert et al.(2019) pTH9309	0.991	0.160
PHF21A M01682_2.00	Monodelphis domestica	NNNNNHRH	DYDNNNNN	PBM Weirauch et al.(2014) pTH9335	0.991	0.160
Setbp1 M01683_2.00	Mus musculus	NDNNNNNNHN	NDNNNNNNHN	PBM Weirauch et al.(2014) pTH1294	0.991	0.160
Phf21a M01684_2.00	Mus musculus	NNNATATWAATN	NATTWATATNNN	PBM Weirauch et al.(2014) pTH8550	0.991	0.160
Xrp1 M01686_2.00	Drosophila melanogaster	NNNNDWAWW	WWTWHNNNN	PBM Weirauch et al.(2014) pTH9260	0.991	0.160
PK00377.1 M01107_2.00	Cannabis sativa	DAWWWAWW	WWTWWWTH	PBM Lambert et al.(2019) pTH11338	0.991	0.160
PK26376.1 M01108_2.00	Cannabis sativa	DDWWWAWW	WWTWWWHH	PBM Lambert et al.(2019) pTH11261	0.991	0.160
Xrp1 M05900_2.00	Drosophila melanogaster	RTKRYGYAAT	ATTRCRYMAY	B1H Zhu et al.(2011) Xrp1_CG6272_SANGER_5_FBgn0261113	0.991	0.160
kmt2cb M01679_2.00	Danio rerio	WWAWAWAT	ATWTWTWW	PBM Weirauch et al.(2014) pTH7876	0.991	0.140
Ahctf1 M00750_2.00	Mus musculus	AAAWAWAW	ATWTWTTT	PBM Weirauch et al.(2013) pTH2361	0.991	0.140
SUM1 M01517_2.00	Saccharomyces cerevisiae	NNNDWAWW	WWTWHNNN	PBM Zhu et al.(2009) Sum1	0.991	0.000
For this family, TFs with SR scores > 0.990* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
estExt_Genewise1Plus.C_20997	AT hook	46	58	KRSRGRPKGSKNK
estExt_Genewise1Plus.C_20997	AT hook	79	91	KRKRGRPPKPKKP
estExt_Genewise1Plus.C_20997	AT hook	103	115	KRKRGRPPKNPKP
estExt_Genewise1Plus.C_20997	AT hook	134	144	KKKRGRPPKSA

Links
Other AT hook family TFs
Other *Heterobasidion annosum* TFs

1072 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Aan_R008874	Calypte anna	Aan_R008874	I	0.000
Afo_R002341	Aptenodytes forsteri	Afo_R002341	I	0.000
Cmyd_10013542	Chelonia mydas	Cmyd_10013542	I	0.000
ENSAMEG00000016587	Ailuropoda melanoleuca	ENSAMEG00000016587	I	0.000
ENSAPLG00000010304	Anas platyrhynchos	ENSAPLG00000010304	I	0.000
MGA	Bos taurus	ENSBTAG00000015138	I	0.000
MGA	Canis familiaris	ENSCAFG00000009662	I	0.000
MGA	Choloepus hoffmanni	ENSCHOG00000012044	I	0.000
MGA	Callithrix jacchus	ENSCJAG00000020688	I	0.000
ENSCSAG00000007832	Chlorocebus sabaeus	ENSCSAG00000007832	I	0.000
MGA	Equus caballus	ENSECAG00000006544	I	0.000
MGA	Erinaceus europaeus	ENSEEUG00000004604	I	0.000
ENSFALG00000006030	Ficedula albicollis	ENSFALG00000006030	I	0.000
MGA	Felis catus	ENSFCAG00000007347	I	0.000
MGA	Homo sapiens	ENSG00000174197	D	0.000
ENSGALG00000008653	Gallus gallus	ENSGALG00000008653	I	0.000
MGA	Gorilla gorilla	ENSGGOG00000001640	I	0.000
ENSLACG00000002619	Latimeria chalumnae	ENSLACG00000002619	I	0.000
ENSLOCG00000011689	Lepisosteus oculatus	ENSLOCG00000011689	I	0.000
MGA	Meleagris gallopavo	ENSMGAG00000011293	I	0.000
MGA	Microcebus murinus	ENSMICG00000001788	I	0.000
MGA	Myotis lucifugus	ENSMLUG00000015227	I	0.000
MGA	Monodelphis domestica	ENSMODG00000000052	I	0.000
ENSMPUG00000008968	Mustela putorius furo	ENSMPUG00000008968	I	0.000
Mga	Mus musculus	ENSMUSG00000033943	I	0.000
ENSNLEG00000003750	Nomascus leucogenys	ENSNLEG00000003750	I	0.000
MGA	Ornithorhynchus anatinus	ENSOANG00000004502	I	0.000
ENSOARG00000020404	Ovis aries	ENSOARG00000020404	I	0.000
MGA	Oryctolagus cuniculus	ENSOCUG00000006505	I	0.000
MGA	Otolemur garnettii	ENSOGAG00000016028	I	0.000
ENSP00000219905	Macaca fascicularis	ENSP00000219905	I	0.000
ENSP00000219905-D1	Bos grunniens	ENSP00000219905-D1	I	0.000
MGA	Procavia capensis	ENSPCAG00000013131	I	0.000
ENSPPYG00000006380	Pongo abelii	ENSPPYG00000006380	I	0.000
MGA	Pan troglodytes	ENSPTRG00000006953	I	0.000
MGA	Pteropus vampyrus	ENSPVAG00000013732	I	0.000
Mga	Rattus norvegicus	ENSRNOG00000006378	I	0.000
MGA	Sorex araneus	ENSSARG00000007043	I	0.000
ENSSTOG00000000653	Ictidomys tridecemlineatus	ENSSTOG00000000653	I	0.000
ENSTSYG00000014605	Tarsius syrichta	ENSTSYG00000014605	I	0.000
MGA	Tursiops truncatus	ENSTTRG00000002514	I	0.000
MGA	Vicugna pacos	ENSVPAG00000006239	I	0.000
Gfo_R014126	Geospiza fortis	Gfo_R014126	I	0.000
Myotis_brandtii_MGA_10023843	Myotis brandtii	Myotis_brandtii_MGA_10023843	I	0.000
Ogr06446	Ophisaurus gracilis	Ogr06446	I	0.000
Pvit_03503	Pogona vitticeps	Pvit_03503	I	0.000
XP_002933783	Xenopus tropicalis	XP_002933783	I	0.000

estExt_Genewise1Plus.C_20997 (Heterobasidion annosum) AT hook

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1072 Related TFs

estExt_Genewise1Plus.C_20997 **(Heterobasidion annosum)
AT hook**