CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo9g004050
(
Brassica oleracea
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bo9g004050
T018742_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g004050.1
B3
21
121
FDKVLTTSDVGKLNRLVIPKQHAENYFPLEEIQNGTMLDFQDRNGKMWKFRYLYWSSSQSYVMTKGWVRFVKDKNLESGDTISFHRSYVLDDTEPGKRIKK
Links
Other
B3
family TFs
Other
Brassica oleracea
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC216872.3_FG002
Zea mays
AC216872.3_FG002
N
0.700
Bo00853s090
Brassica oleracea
Bo00853s090
I
0.726
Bostr.7365s0004
Boechera stricta
Bostr.7365s0004
I
0.714
Bra008552
Brassica rapa
Bra008552
I
0.707
Bra037417
Brassica rapa
Bra037417
N
0.918
OPUNC04G20430
Oryza punctata
OPUNC04G20430
I
0.703
SapurV1A.0666s0090
Salix purpurea
SapurV1A.0666s0090
I
0.700
NGA4
Arabidopsis lyrata
scaffold_604140.1
I
0.739
Thhalv10028783m.g
Eutrema salsugineum
Thhalv10028783m.g
I
0.758
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.893