CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.012G151000
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.012G151000
T023402_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.012G151000.1
B3
18
112
FYKLIVASILQDKKLRIPNKFVKKFGDELSSVATLTVPGGRQWLVELREEDKRIWLDNGWNTFVEYYSICIGYFVVFKYEGNSHFGVHVYNLKSS
Gorai.012G151000.1
B3
268
363
CRIILRPSYVYKGVLLHLPRCFARRYLNGVDGVIMLQIPEGKKWPVQCVYCNDNLKFSKGWAEFVLDNNLDEGDVCIFELINTKEIVLKVTIFRAL
Gorai.012G151000.2
B3
51
145
FYKLIVASILQDKKLRIPNKFVKKFGDELSSVATLTVPGGRQWLVELREEDKRIWLDNGWNTFVEYYSICIGYFVVFKYEGNSHFGVHVYNLKSS
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29693.m002041
Ricinus communis
29693.m002041
N
29693.m002042
Ricinus communis
29693.m002042
N
cassava9826.m1
Manihot esculenta
cassava9826.m1
N
Ciclev10006427m.g
Citrus clementina
Ciclev10006427m.g
N
Ciclev10006439m.g
Citrus clementina
Ciclev10006439m.g
N
Ciclev10006500m.g
Citrus clementina
Ciclev10006500m.g
N
Ciclev10006503m.g
Citrus clementina
Ciclev10006503m.g
N
Ciclev10006530m.g
Citrus clementina
Ciclev10006530m.g
N
Ciclev10006559m.g
Citrus clementina
Ciclev10006559m.g
N
Ciclev10006587m.g
Citrus clementina
Ciclev10006587m.g
N
Ciclev10006588m.g
Citrus clementina
Ciclev10006588m.g
N
Ciclev10006708m.g
Citrus clementina
Ciclev10006708m.g
N
Ciclev10006740m.g
Citrus clementina
Ciclev10006740m.g
N
Ciclev10006803m.g
Citrus clementina
Ciclev10006803m.g
N
Ciclev10006957m.g
Citrus clementina
Ciclev10006957m.g
N
Ciclev10006958m.g
Citrus clementina
Ciclev10006958m.g
N
Ciclev10007010m.g
Citrus clementina
Ciclev10007010m.g
N
Ciclev10007015m.g
Citrus clementina
Ciclev10007015m.g
N
Ciclev10007090m.g
Citrus clementina
Ciclev10007090m.g
N
Ciclev10007104m.g
Citrus clementina
Ciclev10007104m.g
N
Cla009921
Citrullus lanatus
Cla009921
N
Cucsa.047600
Cucumis sativus
Cucsa.047600
N
orange1.1g038327m.g
Citrus sinensis
orange1.1g038327m.g
N
orange1.1g040485m.g
Citrus sinensis
orange1.1g040485m.g
N
orange1.1g044532m.g
Citrus sinensis
orange1.1g044532m.g
N
orange1.1g047467m.g
Citrus sinensis
orange1.1g047467m.g
N
POPTR_0001s25850
Populus trichocarpa
POPTR_0001s25850
N