29693.m002042 (Ricinus communis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 29693.m002042 T257144_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29693.m002042 MADS box 17 64

Links

Other MADS box family TFs
Other Ricinus communis TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.896
Cla009921 Citrullus lanatus Cla009921 N 0.875
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.875
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.875
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.854
29693.m002041 Ricinus communis 29693.m002041 N 0.833
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.833
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.812
Pm008734 Prunus mume Pm008734 N 0.812
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.812
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.812
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.812
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.812
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.812
MDP0000696333 Malus domestica MDP0000696333 N 0.812
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.812
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.792
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.792
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.792
Eucgr.E02870 Eucalyptus grandis Eucgr.E02870 N 0.792
Eucgr.E02872 Eucalyptus grandis Eucgr.E02872 N 0.792
Eucgr.L01236 Eucalyptus grandis Eucgr.L01236 N 0.792
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.771
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.771
orange1.1g043113m.g Citrus sinensis orange1.1g043113m.g N 0.765
Eucgr.E02824 Eucalyptus grandis Eucgr.E02824 N 0.750
Eucgr.E02827 Eucalyptus grandis Eucgr.E02827 N 0.750
Eucgr.E02829 Eucalyptus grandis Eucgr.E02829 N 0.750
Eucgr.E02866 Eucalyptus grandis Eucgr.E02866 N 0.750
orange1.1g038327m.g Citrus sinensis orange1.1g038327m.g N 0.750
Bo4g157220 Brassica oleracea Bo4g157220 N 0.729
cassava46357.m1 Manihot esculenta cassava46357.m1 N 0.729
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.729
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.729
Gorai.009G284300 Gossypium raimondii Gorai.009G284300 N 0.729
Gorai.012G147900 Gossypium raimondii Gorai.012G147900 N 0.729
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.729
SapurV1A.1613s0060 Salix purpurea SapurV1A.1613s0060 N 0.729
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.729
Ciclev10006588m.g Citrus clementina Ciclev10006588m.g N 0.721
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
Bra032057 Brassica rapa Bra032057 N 0.708
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.708
Pm030654 Prunus mume Pm030654 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.708
Gorai.010G132900 Gossypium raimondii Gorai.010G132900 N 0.708
Gorai.010G133300 Gossypium raimondii Gorai.010G133300 N 0.708
Gorai.012G148000 Gossypium raimondii Gorai.012G148000 N 0.708
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.708
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.708
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.708
PDK_20s1551551g001 Phoenix dactylifera PDK_20s1551551g001 I 0.708