CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm030654
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm030654
T257095_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm030654
MADS box
18
65
KIEKEDDLLVSFSKRRSGISKKASDMITLCGGEVAIVIFSPSGKPFSF
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa022905mg
Prunus persica
PRUPE_ppa022905mg
N
0.938
MDP0000696333
Malus domestica
MDP0000696333
N
0.812
Ciclev10006503m.g
Citrus clementina
Ciclev10006503m.g
N
0.708
Ciclev10006958m.g
Citrus clementina
Ciclev10006958m.g
N
0.708
Ciclev10007104m.g
Citrus clementina
Ciclev10007104m.g
N
0.708
Cucsa.047600
Cucumis sativus
Cucsa.047600
N
0.708
cassava9834.m1
Manihot esculenta
cassava9834.m1
N
0.708
Cla009921
Citrullus lanatus
Cla009921
N
0.708
29693.m002042
Ricinus communis
29693.m002042
N
0.708
cassava39120.m1
Manihot esculenta
cassava39120.m1
N
0.708
PGSC0003DMG400045423
Solanum tuberosum
PGSC0003DMG400045423
N
0.700